Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1718 ATGGGGTTGGGTGCTGACAATGGCAAGGTGGAGTCTTGCGATGTGAGCAAATCAAAGGGGAGGAAGAAGAAGGAGAAAGATGATGGGGTTGTGAAAGAGAAAGAGACTGGGTGTTGGGTTAGACTGAGGTTCATTGGGAGCTGCATTTCTTCAAGATCTAAGGTTGATAGCTCAGTTAGCGGCATCAGTACTCATTATGCTGAAAGTAAGTCAACTAATGATACAAGTAGAGACCAACCAACGGCTCCAGTAGTCTCTTCTACAACAACTAGTAATACGGAAAGTAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAATTTGCATTTAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGCGGATTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACCCTTAATCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAATTCATCCAAACCTCGTTAAACTTATAGGCTACTGTATAGAAGATGATCAACGATTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTGGAAAACCACCTATTTAGGAGATCACTGCCACTTCCGTGGTCCATCAGAATGAAAATTGCACTAGGAGCTGCAAAGGGTCTAGCTTTTCTTCACGAGGAAGCTGAACGGCCAGTAATATATAGGGACTTTAAAACTTCCAATATACTATTAGATGCAGACTACAATGCCAAGCTCTCGGATTTTGGACTTGCCAAAGATGGGCCAGAGGGTGATAAAACCCATGTGTCTACTCGTGTGATGGGAACTTACGGTTACGCAGCACCAGAATATGTCATGACAGGACATCTTACCTCAAGAAGTGATGTATACAGTTTTGGGGTGGTACTACTTGAGATGTTGACTGGCAGGAGATCTATGGACAAAAACAGACCCAATGGTGAGCATAACCTTGTTGAATGGGCTCGGCCACATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGATCCTCGGCTAGAAGGTCACTTCTCGATTAAAGGGGCTCAAAAAGCTACCCAACTGGCTGCTCATTGCCTTAGTAGAGATCCAAAAGCCAGACCCTTAATGAGTGAAGTTGTAGAAGCTTTAAAGCATCTGCCAAACCTTAAGGACATGGCAAGCTCATCATATTATTTTCAGACGATGCAAGCTGACCGCTTTGGAGCTAGCCCTAATACTCGAAACGGACGGACACAAGGAGCATTGCTTACCCGGAACGGGCAGCAGCATAGGAGCCTTTCAATACCACATGGTTCTTATGCATCTCCTTATCACCATCAGTATCCCCAACAATCACCAAAACCCAACGGCAAAGCATAG 1452 0.4463 MGLGADNGKVESCDVSKSKGRKKKEKDDGVVKEKETGCWVRLRFIGSCISSRSKVDSSVSGISTHYAESKSTNDTSRDQPTAPVVSSTTTSNTESNSSTSKLEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKATQLAAHCLSRDPKARPLMSEVVEALKHLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTQGALLTRNGQQHRSLSIPHGSYASPYHHQYPQQSPKPNGKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1718 483 FunFam Serine/threonine-protein kinase BIK1 94 212 - -
Bisa01g1718 483 Gene3D Phosphorylase Kinase; domain 1 86 212 - -
Bisa01g1718 483 PANTHER OS01G0588500 PROTEIN-RELATED 91 410 - -
Bisa01g1718 483 MobiDBLite consensus disorder prediction 1 31 - -
Bisa01g1718 483 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Bisa01g1718 483 Pfam Protein tyrosine and serine/threonine kinase 131 407 IPR001245 GO:0004672|GO:0006468
Bisa01g1718 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Bisa01g1718 483 FunFam Probable serine/threonine-protein kinase PBL8 213 428 - -
Bisa01g1718 483 MobiDBLite consensus disorder prediction 12 31 - -
Bisa01g1718 483 MobiDBLite consensus disorder prediction 66 103 - -
Bisa01g1718 483 MobiDBLite consensus disorder prediction 468 483 - -
Bisa01g1718 483 SUPERFAMILY Protein kinase-like (PK-like) 113 427 IPR011009 -
Bisa01g1718 483 ProSiteProfiles Protein kinase domain profile. 127 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1718 483 MobiDBLite consensus disorder prediction 449 483 - -
Bisa01g1718 483 CDD STKc_IRAK 133 410 - -
Bisa01g1718 483 MobiDBLite consensus disorder prediction 66 99 - -
Bisa01g1718 483 Gene3D Transferase(Phosphotransferase) domain 1 213 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1718 Bisa-ChrBisa01 29658217 29661948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1718 74 423 Glycoside Hydrolase AT3G07070 51.977 5.31e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa01g1718 PK_Tyr_Ser-Thr 6.4e-46 CL0016