Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1713 ATGGAACTACAGTTGGGTCTGATAGACCAATCATTCAATTGCCGTTACTCTTACTATGTTCACGAGGCTCTCGACGAATTGCCTGACAATTTTATCATCACCGACCCTTCTCTCCCTGGCCATCCAATTGTATTTGCAAGCCTTGGATTCTTGAAAATCTCAGGGTATTCCAAAGACGAGGTGATTGGCAAGAATGGTAGAATTTTTCAAGGACCAGGGACTTGTAGAAGGTCGGTAATAGAAATTCGAGAGGCAATAAGAGAAGAGAGAGCTATTCAGATCAATTTGTTGAATTATCGTAAAGACGGAACACCCTTTTGGATGTTATTTCATATGAGCCCTGTATTTAACAAGTATGATGGCAGGGTGAGTCACTTCGTGGCAGTTCAGGTTCCTTTATCGAGTAAACGGAGGCGGTCGGGATGTGGGTTTTGGAGAAATGAAGTTAATTTGAGTGAGGATGGGTCTAATGCGCAGGATTTTGTGTATGGATCATGTCGGAAGGAAGTATGCTCGGATTCTTTGTTGGAACTTGTTCATGTTTTGTCCCTTCACCAAGTTTTAGAATCAGATGAGTTGAAAGAATCAGATAGCGAAGAGCCGTGTGAGGTAAGTGACGCTGCAAAGAGAAGAGCTATGACTGCCATGGACAACATTTTTTCTGTGCTAACCCACTATAGCGAGTTAACTGGCAGATTGGTTTGTAGAAAGAGATGCAGCATTTCTGACGCGGGTCTTATTAGCTCATCCTTGATTATATCACTTGGTAGAATTAAACAAAGCTTTGTATTAACTAATCCACACTTGCCTGACTTGCCTATTGTGTACGCCAGTGGTGCCTTCTTGAAATTGACAGGTTATGTGAGAGATGAAGTGTTGGGGCGCAATTGTAGATTTCTAAGTGGATTGAATACTGATACCTCAACGTTATATGCGATAAGGGAATGCATTAAATCTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGATGAAAGCTCATTTTGGAATTTTCTTCACATATCACCTGTTCGTGATGCTTCTGGGAAGTTAGCATACTTTGTGGGTGTTCAAATAGAAGAAGGCTATAATAACAGGCAAGAGAGACAGGGTTTTAGCCCTGACAGGAGGCAGCTTAGCGTAGTTGGTGCAGTAAAGGTTGCTGTGAGGAGTTCATCATTGACTGCTGGATCTTCAAAGTGA 1209 0.4194 MELQLGLIDQSFNCRYSYYVHEALDELPDNFIITDPSLPGHPIVFASLGFLKISGYSKDEVIGKNGRIFQGPGTCRRSVIEIREAIREERAIQINLLNYRKDGTPFWMLFHMSPVFNKYDGRVSHFVAVQVPLSSKRRRSGCGFWRNEVNLSEDGSNAQDFVYGSCRKEVCSDSLLELVHVLSLHQVLESDELKESDSEEPCEVSDAAKRRAMTAMDNIFSVLTHYSELTGRLVCRKRCSISDAGLISSSLIISLGRIKQSFVLTNPHLPDLPIVYASGAFLKLTGYVRDEVLGRNCRFLSGLNTDTSTLYAIRECIKSEQPCTVRILNYRKDESSFWNFLHISPVRDASGKLAYFVGVQIEEGYNNRQERQGFSPDRRQLSVVGAVKVAVRSSSLTAGSSK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1713 402 PANTHER PROTEIN TWIN LOV 1 6 393 - -
Bisa01g1713 402 Gene3D PAS domain 261 397 - -
Bisa01g1713 402 Gene3D PAS domain 30 160 - -
Bisa01g1713 402 ProSiteProfiles PAS repeat profile. 16 65 IPR000014 -
Bisa01g1713 402 ProSiteProfiles PAS repeat profile. 274 296 IPR000014 -
Bisa01g1713 402 SMART pas_2 249 322 IPR000014 -
Bisa01g1713 402 SMART pas_2 18 87 IPR000014 -
Bisa01g1713 402 FunFam protein TWIN LOV 1 261 398 - -
Bisa01g1713 402 CDD PAS 27 130 IPR000014 -
Bisa01g1713 402 SUPERFAMILY PYP-like sensor domain (PAS domain) 28 130 IPR035965 -
Bisa01g1713 402 SUPERFAMILY PYP-like sensor domain (PAS domain) 264 360 IPR035965 -
Bisa01g1713 402 NCBIfam PAS domain S-box protein 274 359 IPR000014 -
Bisa01g1713 402 NCBIfam PAS domain S-box protein 42 128 IPR000014 -
Bisa01g1713 402 Pfam PAS domain 262 360 IPR000014 -
Bisa01g1713 402 Pfam PAS domain 30 131 IPR000014 -
Bisa01g1713 402 CDD PAS 270 359 IPR000014 -
Bisa01g1713 402 SMART pac_2 93 136 IPR001610 -
Bisa01g1713 402 SMART pac_2 324 363 IPR001610 -
Bisa01g1713 402 FunFam Protein TWIN LOV 1 isoform D 30 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1713 Bisa-ChrBisa01 29611692 29614812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1713 15 391 AGC Kinase Gene Family AT5G58140 31.796 7.92e-62 212