Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1675 ATGGATCCGACTGCTATGAATATGATGAACGAGGGTTCCTTTGCAAATGGGAATGGCAATACGGCGCCGTATAACTTGGCGGAGATCTGGCAGTTCCCGTTGAATGGCGGTGCGGGTCTCGGGGAGTCCGGAAGCGGATTGGGTTTGAGGACACCGCAGTTCGGGCATAATTTGGGACAGTTCGGTGATTTTACGCCAGGTCCGAATCGGGATGGACCGGGTAATGATCCGATCGGTTCGGAGCAGAGGGCAAATGGAGTCAATAGGAAGAGGCGCGATTCGGAGGATGAGTTGGTCAAGGGCGTCTCCGCCGCCAGCAACGGGGGCACTGGTAATTGCAATGGCATGAATGATGGTGATGGAAAACGGCTTAAAACATCTGGGAATAGGACGGAGAGCCGTGATACTAAAGTTGAAGGAGAAAACAGTTCAGGAAAGCCTGCGGAGCAAAGTACTCAGCCAGCTCCCGAGCCACCTAAGCAAGATTACATCCATGTACGAGCGAGAAGGGGTCAAGCTACTGATAGCCACAGTCTAGCAGAAAGAGCTAGGAGGGAAAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTTCCTGGTTGTAATAAGGTTATTGGGAAAGCGTTGGTCCTTGATGAAATTATTAATTATATTCAGTCACTACAGCGCCAAGTTGAGTTCTTATCAATGAAGCTTGAAACTGTGAATTCAAGAGTGAACCCCGGCATCGAAATGTTTCCTCCTAAAGATTTTGGTCAACAAACATTTGACACAGCTGGGATGGCAATTGGTTCTCAAGCGACTAGAGAGTTCAGCCGAGGTTCACCGCCAGAGTGGTTACACATGCAGGTAGGAGGTGGTTTTGAAAGAACATCATAG 882 0.4875 MDPTAMNMMNEGSFANGNGNTAPYNLAEIWQFPLNGGAGLGESGSGLGLRTPQFGHNLGQFGDFTPGPNRDGPGNDPIGSEQRANGVNRKRRDSEDELVKGVSAASNGGTGNCNGMNDGDGKRLKTSGNRTESRDTKVEGENSSGKPAEQSTQPAPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRVNPGIEMFPPKDFGQQTFDTAGMAIGSQATREFSRGSPPEWLHMQVGGGFERTS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1675 293 CDD bHLH_AtBPE_like 162 245 - -
Bisa01g1675 293 MobiDBLite consensus disorder prediction 45 160 - -
Bisa01g1675 293 SMART finulus 178 228 IPR011598 GO:0046983
Bisa01g1675 293 MobiDBLite consensus disorder prediction 85 99 - -
Bisa01g1675 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 240 IPR036638 GO:0046983
Bisa01g1675 293 Gene3D - 169 243 IPR036638 GO:0046983
Bisa01g1675 293 Coils Coil 219 239 - -
Bisa01g1675 293 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 95 261 IPR024097 GO:0006355
Bisa01g1675 293 FunFam Basic helix-loop-helix transcription factor 169 241 - -
Bisa01g1675 293 Pfam Helix-loop-helix DNA-binding domain 176 223 IPR011598 GO:0046983
Bisa01g1675 293 MobiDBLite consensus disorder prediction 123 142 - -
Bisa01g1675 293 MobiDBLite consensus disorder prediction 143 157 - -
Bisa01g1675 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1675 Bisa-ChrBisa01 28941951 28944248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1675 1 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.731 6.97e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1675 HLH 2.4e-08 No_clan