Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1667 ATGTCGTCGTCGAAGGTTGTGACGACGAATCTGGATCAGTCATGTCAATCTTCATCGTCCTCCGTTTCTTCTATTCTAGCCGACCTCTCCAAGACCTCGGCTTCCATGATCATAGACGACCTCATCAAGTTCAATCACTCGACCTCCGAGCTTGAACCCTACTCTCTACCCATGCTTGCTTTGATGCGCTTTTATGAGAACGTGAACCCCATTTCGCCCATCATGAAGGTCATCTTTCTCTTCGCTTCAATCTTGCTCCTTTATTCATCATCCTTTTGCGTTTCCGTCGAGGACGATGTGATTTGCCTGCAAGGCGTGAAGAACTCATTCTCCGATCCAAATGGAAAACTCAGCTCTTGGAGCTTTACCAACACTTCCGTGGCCTCAATCTGCCAGCTCGTCGGCGTCTCTTGCTGGAACGAGAAGGAGACCCGCCTCATTAGTCTCCAGCTCCGTGATATGCAGCTCGCCGGAAAGCTTCCTGAGTCGCTCAAGTACTGCCGGAGCCTCCAGACCCTCGAACTCTCCGGTAACGCTCTATCCGGTTCGATCCCTTCTAATATCTGTACCTGGTTGCCTTATTTAGTGACCCTAGATCTCTCCGGTAACCAAATCTCGGGTTCAATCCCACCCGAGATTGCGAACTGTAAGTTCCTGAATACCCTTGTTTTGAACGATAACCAGTTATCTGGTTCGATCCCCTATGAGTTGGGTCGGCTTGACAGATTGAAGAAGTTCTCTGTTGCCAATAACGATCTTTCGGGTTCTATACCTCCAGATTTGTCCAAAATTAATGAAGCTGATTTTGATGGGAATAGTGGGTTGTGTGGGAAGCCTGTTGGGTCAAAGTGTGGTGGGTTGAGTCGAAAGAGTCTTGGGATTATTATTGTTGCTGGTGTTGTTGGAGCCATGGGATCTTTGTTTCTGGGTTTCGCTATCTGGTGGTGGTTCTTCCTAAGAGTCAGTGAGAAAAAGAGAGGGCATAGTGGAGATGGTGGTGGGAAGCATTTAAGTGATTGGATTGAGTTGTTGAAGTCACACAAGCTTGCTCAAGTCTGTTTGTTCCAGAAACCAATAGTAAAAGTTAGATTAGCTGATTTATTGGTGGCTACCAACAGTTTTCATCGAGAAAATATTGTGATTTCTACTAGAACAGGGGTTTCTTATAAGGCAGTATTGCGTGATGGGTCAGCTCTTGCGATAAAGAGGCTTAATTCTTGTAAACTTAGTGAGAAGCAATGTAGATCAGAGATGAATAGGTTGGGGCAGCTTAGACACCCCAATTTGGTACCTTTGTTAGGTTTCTGTACGGTGGAAGAAGAGAAGCTTCTGGTGTATAAGCACATGTTCAATGGGACCTTGTATTCTCAGTTGCATAAAAATGGTAATAGTAATGCTAATAGTCAGTACAGTTTTCTGGACTGGCCAACTAGGCTGAGGATCGGGGTAGGTGCAGCCAGAGGACTTGCTTGGCTTCACCATGCTTCTCAACCTCCACATATTCACCAGAACATTAGCTCAAACATAATCCTTCTTGACTATGATTTTGAAGCTCGAATAACTGACTTCGGATTGGCAAGGCTTGTGGTTGCTCGTGATCCCAATGACAGCTCCTTTGTGAATGGTGATCTGGGTGAGTTTGGTTATGTTGCTCCTGAGTACTCAAGCACCATGGTTGCTTCACTGAAAGGGGATGTTTATGGTTTTGGAGTAGTTCTTTTGGAATTGGTCACAGGGCAGAAGCCAGTGGAAGTAAACAGTGGAGGGGAAGGATTCAAAGGGAATTTAGTGGATTGGGTGAACTGGTTAGCAATCACAGGTAGAAATAAGGATGCCATAGACAAAGCATTGTTGAATGAGAGTCATGAACATGGTGATGAAATTATGCAGTTCATGCAGGTTGCCTTGTCTTGTGTTGTTTCTAGGCCTAAAGATAGACCTTCCATGTACCAGGTCTTCTCCTCACTGAAGAGCATGGCTGAGAAACATGGTTTTTCGGATCAGTATGATGATTTCCCTGTTGTCTGTGGCAAACAAGACTCTGACTATAACGAGAATTAG 2061 0.4527 MSSSKVVTTNLDQSCQSSSSSVSSILADLSKTSASMIIDDLIKFNHSTSELEPYSLPMLALMRFYENVNPISPIMKVIFLFASILLLYSSSFCVSVEDDVICLQGVKNSFSDPNGKLSSWSFTNTSVASICQLVGVSCWNEKETRLISLQLRDMQLAGKLPESLKYCRSLQTLELSGNALSGSIPSNICTWLPYLVTLDLSGNQISGSIPPEIANCKFLNTLVLNDNQLSGSIPYELGRLDRLKKFSVANNDLSGSIPPDLSKINEADFDGNSGLCGKPVGSKCGGLSRKSLGIIIVAGVVGAMGSLFLGFAIWWWFFLRVSEKKRGHSGDGGGKHLSDWIELLKSHKLAQVCLFQKPIVKVRLADLLVATNSFHRENIVISTRTGVSYKAVLRDGSALAIKRLNSCKLSEKQCRSEMNRLGQLRHPNLVPLLGFCTVEEEKLLVYKHMFNGTLYSQLHKNGNSNANSQYSFLDWPTRLRIGVGAARGLAWLHHASQPPHIHQNISSNIILLDYDFEARITDFGLARLVVARDPNDSSFVNGDLGEFGYVAPEYSSTMVASLKGDVYGFGVVLLELVTGQKPVEVNSGGEGFKGNLVDWVNWLAITGRNKDAIDKALLNESHEHGDEIMQFMQVALSCVVSRPKDRPSMYQVFSSLKSMAEKHGFSDQYDDFPVVCGKQDSDYNEN 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1667 686 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 144 658 - -
Bisa01g1667 686 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 96 285 - -
Bisa01g1667 686 Pfam Leucine Rich repeat 193 207 IPR001611 GO:0005515
Bisa01g1667 686 Pfam Leucine Rich repeat 166 182 IPR001611 GO:0005515
Bisa01g1667 686 Pfam Leucine rich repeat N-terminal domain 97 139 IPR013210 -
Bisa01g1667 686 CDD STKc_IRAK 382 659 - -
Bisa01g1667 686 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 335 448 - -
Bisa01g1667 686 Gene3D Ribonuclease Inhibitor 97 286 IPR032675 -
Bisa01g1667 686 SUPERFAMILY Protein kinase-like (PK-like) 353 656 IPR011009 -
Bisa01g1667 686 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 449 678 - -
Bisa01g1667 686 Gene3D Transferase(Phosphotransferase) domain 1 449 679 - -
Bisa01g1667 686 Pfam Protein tyrosine and serine/threonine kinase 397 655 IPR001245 GO:0004672|GO:0006468
Bisa01g1667 686 Gene3D Phosphorylase Kinase; domain 1 335 448 - -
Bisa01g1667 686 ProSiteProfiles Protein kinase domain profile. 374 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1667 686 SUPERFAMILY L domain-like 93 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1667 Bisa-ChrBisa01 28754672 28759188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1667 75 681 Receptor kinase-like Gene Family AT1G27190 65.517 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Bisa01g1667 PK_Tyr_Ser-Thr 9.9e-30 CL0016