Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1665 ATGCCTCGCACGTGCTCGCAGTGTGGCAGCAACGGCCACAACTCCAGAACATGCGCCGACGGGAGTGGCGGTGGCGGCGGTGCCGGTGAGAATGGTATCTTGTTGTTCGGCGTGCGAGTGACGCAATGGAACTCGTTTAGAAAAAGTGCTAGCATGACTGATCTCTCCCAGTACGAGCAGCCGCCGCCTCGGGATTCCAACGCCGACTCTGGTTACGCCTCCGACGGTGTCGTTCAAGCCTCTGGCCGCAGCCGCGAGCGCAAGAGAGGTGTGCCGTGGACGGAGGAGGAGCATAGGTTATTCCTGTTGGGGTTACAAAATGTTGGGAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACTCGGACACCAACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTCCGTCGCCATAACCAGAACCGGAGACGCCGGAGATCTAGTCTATTTGATATCACCACTGATACGGTGATGGAATCCTCAACAATAGTGGAAGAAGGAGGAGTCCATCAAGAATCAGCACCACCCAAATATCCCCATTACAGTGGATTTCCCGGTTCTGCTTTTCCCATGATGCTACCTCCGCCGGTGGGAGCTAAGCCGACAAGGCCCACGCCTATTCTACCAGTTGCTCCATCGTCAAAAATGGCTAATCTAAACTTGAAGGAAAAAGCTCACATGATTGACCCTCTGCCATTATCGCTGAAGCTCCCGACGCCAAGCAAGGAGCCGTCGCCGTCTTCGTCATCGTCTTCGGCTTTTGAGGTGATGTCTGGGAAGTTGAGCGGCGGTGGGGATAGCATGATCAGTGTTGCTTGA 828 0.5423 MPRTCSQCGSNGHNSRTCADGSGGGGGAGENGILLFGVRVTQWNSFRKSASMTDLSQYEQPPPRDSNADSGYASDGVVQASGRSRERKRGVPWTEEEHRLFLLGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIVEEGGVHQESAPPKYPHYSGFPGSAFPMMLPPPVGAKPTRPTPILPVAPSSKMANLNLKEKAHMIDPLPLSLKLPTPSKEPSPSSSSSSAFEVMSGKLSGGGDSMISVA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1665 275 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Bisa01g1665 275 ProSiteProfiles SANT domain profile. 88 141 IPR017884 -
Bisa01g1665 275 MobiDBLite consensus disorder prediction 243 260 - -
Bisa01g1665 275 FunFam transcription factor MYB1R1 91 142 - -
Bisa01g1665 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 141 IPR017930 -
Bisa01g1665 275 Pfam Myb-like DNA-binding domain 92 137 IPR001005 -
Bisa01g1665 275 Gene3D - 91 142 - -
Bisa01g1665 275 MobiDBLite consensus disorder prediction 52 91 - -
Bisa01g1665 275 MobiDBLite consensus disorder prediction 235 275 - -
Bisa01g1665 275 SMART sant 89 139 IPR001005 -
Bisa01g1665 275 SUPERFAMILY Homeodomain-like 87 140 IPR009057 -
Bisa01g1665 275 CDD SANT 92 137 IPR001005 -
Bisa01g1665 275 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Bisa01g1665 275 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 139 IPR006447 GO:0003677
Bisa01g1665 275 PANTHER TRANSCRIPTION FACTOR KUA1 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1665 Bisa-ChrBisa01 28612733 28613886 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g1665 Myb_DNA-binding 2.7e-10 CL0123