Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1653 ATGGAGGGCTACGATCCGTCGCCGGCAGATTCTGAAGAAGTTCATGTCTTGGCCGTCGATGACAGCCTCATCGATCGGAAGGTCATCGAGCGCCTGCTCAAGATTTCAGCTTGTAAAGTGACTGCTGTGGATAGTGGAATGAGAGCTCTGCAATTCTTGGGGCTCCACGAGGAGAAAAGCCCCTCTGAATCGGATGGCTTTGATGGTTTGAAGGTGGATCTAATCATCACTGACTACTGTATGCCTGGAATGACCGGCTATGAATTGCTCAAGAAAATCAAGGAATCGTCCAATTTCAGAGAAACCCCTGTGGTGATTATGTCCTCTGAAAATGTTTTGCCCCGTATAGACAGATGTTTGGAGGAAGGAGCAGAGGAATTCATAGTGAAGCCAGTGAAGCTATCTGACGTGAAACGGTTAAGGAATTACATGATGACAAGAGAGGTTAAGGCGGGAAGTAAAGACGGAGAAGGTGTGAGGATCAACAAAAGAAAGCTGTCAGACGCCTCTGACGTGGCTTCATCGTCACCGTCCATTGCCTCATCGGCACTATCATCTTCGCCGTCGCCTTCATCGTCCTCTTCATCTTCACCGTCCATGCTTGATTCTCCAATCAGACGGCTTAAAATGTCCACCGCCGATTGA 645 0.4853 MEGYDPSPADSEEVHVLAVDDSLIDRKVIERLLKISACKVTAVDSGMRALQFLGLHEEKSPSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSNFRETPVVIMSSENVLPRIDRCLEEGAEEFIVKPVKLSDVKRLRNYMMTREVKAGSKDGEGVRINKRKLSDASDVASSSPSIASSALSSSPSPSSSSSSSPSMLDSPIRRLKMSTAD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1653 214 MobiDBLite consensus disorder prediction 152 214 - -
Bisa01g1653 214 SMART REC_2 14 141 IPR001789 GO:0000160
Bisa01g1653 214 MobiDBLite consensus disorder prediction 152 167 - -
Bisa01g1653 214 SUPERFAMILY CheY-like 14 143 IPR011006 -
Bisa01g1653 214 CDD REC_typeA_ARR 16 140 - -
Bisa01g1653 214 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Bisa01g1653 214 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Bisa01g1653 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 182 IPR045279 GO:0009736
Bisa01g1653 214 Gene3D - 14 189 - -
Bisa01g1653 214 MobiDBLite consensus disorder prediction 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1653 Bisa-ChrBisa01 28433715 28434774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1653 8 206 Response Regulator Gene Family AT1G59940 62.381 5.89e-78 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa01g1653 Response_reg 1.2e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1653 01 28433715 28434774 Bisa02g1350 02 23146637 23148581 ECH
Bisa01g1653 01 28433715 28434774 Bisa01g1653 01 28433715 28434774 ECH