Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1646 ATGGATTTATTCAGAATGAATCCGCTAAGTCATTGGTTTGTCAGAGATCTCATTCTCCCTAAGAAAGATATGGAAAAGGAATATGAGTGCGAAATCTCTCCAACATGGGATAATGGAGAAACTGGCCATTCTTCTGTGGAGAAGAGGCTCAAATTATTCGGGTTTGAGCTGAACCTATCCAAGAACGACAGTGAAGTCTGTGTTAAAGACTCTGCGGAAGGAGATGAAAGTGTGAACTCCTCTAACTCTGTTTCATCTGGAGGATTGGAGAAAACTGATCTGCAGGAGAAGAGTTCATCAGCCACAAGAGACGCATCAGATCATGAGAGGAAGTTCGAGTGCCAATATTGTCTCAAGGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAAAATGCCCACAAGAAAGAGAGGATGAAGAAGAAGAGGCTTCAGCTTCAAGCCAGAAAGGCTAGCTTAAGCTACTATCTTCAACCTTTTCAAACCGACTCTGGTTTTGCTTTCCATGGCTCTAGTACTCCTTGGTTCTATGACCCCTCTTCCTATAATGAGTTTTCTTTGCATGAAGAATCTCAGATTAGCTTCAATTCCAATGATCAAGATGCCATTAATCACCTTAATGGTTTTGATCTGAAATCAACGCGGTATCCCCCTCCTCCTCGACAAGCTAATACTCGTATGTTCACTTTATCCCATACAGATAATGGGCCTTTCATCTTCCCTGCAGCCTCAAACCAGAGCCACAGCAATAAAGCTTTGGATCTTCAACTAGGCCTCAACTTGCAGTCAAATGCAAGAGACTCTCTAAGAAGGACGTAA 819 0.4274 MDLFRMNPLSHWFVRDLILPKKDMEKEYECEISPTWDNGETGHSSVEKRLKLFGFELNLSKNDSEVCVKDSAEGDESVNSSNSVSSGGLEKTDLQEKSSSATRDASDHERKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKASLSYYLQPFQTDSGFAFHGSSTPWFYDPSSYNEFSLHEESQISFNSNDQDAINHLNGFDLKSTRYPPPPRQANTRMFTLSHTDNGPFIFPAASNQSHSNKALDLQLGLNLQSNARDSLRRT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1646 272 Pfam C2H2-type zinc finger 112 137 - -
Bisa01g1646 272 PANTHER ZINC FINGER PROTEIN 5 44 262 IPR044299 GO:0010090
Bisa01g1646 272 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Bisa01g1646 272 MobiDBLite consensus disorder prediction 68 106 - -
Bisa01g1646 272 MobiDBLite consensus disorder prediction 74 95 - -
Bisa01g1646 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Bisa01g1646 272 Gene3D Classic Zinc Finger 88 163 - -
Bisa01g1646 272 SUPERFAMILY beta-beta-alpha zinc fingers 108 139 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1646 Bisa-ChrBisa01 28242715 28248463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1646 49 150 C2H2 Transcription Factor Family AT1G68360 44.762 6.72e-17 76.3