Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1645 ATGCCGACAGATAGATCAAAATCGGAGAAACGCGATGCTGCTAAGCAGTTCCGGCGGGATCCCTATGAGGTTCTCGGCGTCTCGTGCAACTCAACTGATCAAGAAATAAAAACTGCTTACAGAAAAATGGCACTCAAATATCATCCAGACAAGAATGCTAATGATCCTAAGGCAGCTGATATGTTTAAAGAAGTTACCTTTTCGTATAATATCTTGTCAGATTCTGAAAAACGGCATCAGTATGACTCAGCTGGTTTTGAGGCTGTTGAATCAGAGAGCCAAGACTTGGAGTTGGATCTTTCAAGTTTAGGTGCTGTGAATACAATGTTTGCAGCACTTTTCAGTAAACTTGGTGTGCCAATTAAGACAACTGTTTCAGCAACTGTTTTGGAAGAGGCACTTAACGGGGCAGTGATCATTTGTCCACTTCCCTTGGGTCAGCCTATATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCAGTTAAATTAACAAAAGAGGAAGCACAGGCCGGATTTGTTTGTCGTGTGCAATCATTAGACAAAAGCAAGTTCAAGTTATTATATTTTGATCAAGAAGAGAATGGTGGATTAAGTCTTGCGCTCCAGGAAGGCAGTGCAAAAAAAGGGAAGGTAACTTCCGCTGGAATGTATTTTCTTGGGTTTCCTGTTTATCAGCTGGATCAAACCATGAACACTATGGCTGCTGTTAAGGATCCAGAAACATCATTTTTTAGAAAGTTGGATGGGTTCCAGGCATGTGAATTAACAGAATTAAAGGCTGGTACCCATGTTTTTGCTGTTTATGGTGACAATTTTTTCAGAAGGGCAAGCTATACAATAGAGGCTTTTTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATCTCAAAAATGTAGAAGCTCAACTCTTATCTAAAAGGGCGGAACTACCAAAGTTCGAAACTGAATACCGAGAGGTTCTGGCACAATTCTCAGAGATGACAAGCAGATATACACAAGAAATGCAGGCAATTGATGAACTACTCAAGCAAAGAAATGAAATACATGCATCATATACTATTGCTTCATCGAAACTAAGTACAAGAAAGAACAGGAGAAAAAGTTCCAAGGAGGCAAAAGAAGATGGCCAAGCAAGGGAGAAGAGGTTTACAAGAGACCGATTGAAGAAGAAGAGATCGTTTAACATCCACTTAAAAGTCAAGAGAAAAGCTTGCTAA 1221 0.398 MPTDRSKSEKRDAAKQFRRDPYEVLGVSCNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDSEKRHQYDSAGFEAVESESQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGAVIICPLPLGQPISKRVEKQCAHFYSVKLTKEEAQAGFVCRVQSLDKSKFKLLYFDQEENGGLSLALQEGSAKKGKVTSAGMYFLGFPVYQLDQTMNTMAAVKDPETSFFRKLDGFQACELTELKAGTHVFAVYGDNFFRRASYTIEAFCAAPFSEEKENLKNVEAQLLSKRAELPKFETEYREVLAQFSEMTSRYTQEMQAIDELLKQRNEIHASYTIASSKLSTRKNRRKSSKEAKEDGQAREKRFTRDRLKKKRSFNIHLKVKRKAC 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1645 406 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Bisa01g1645 406 FunFam Chaperone protein dnaJ 16 4 102 - -
Bisa01g1645 406 PRINTS DnaJ domain signature 77 96 IPR001623 -
Bisa01g1645 406 PRINTS DnaJ domain signature 57 77 IPR001623 -
Bisa01g1645 406 PRINTS DnaJ domain signature 22 40 IPR001623 -
Bisa01g1645 406 PRINTS DnaJ domain signature 40 55 IPR001623 -
Bisa01g1645 406 Coils Coil 290 317 - -
Bisa01g1645 406 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Bisa01g1645 406 MobiDBLite consensus disorder prediction 368 384 - -
Bisa01g1645 406 Gene3D DnaJ domain 4 103 IPR036869 -
Bisa01g1645 406 SMART dnaj_3 19 77 IPR001623 -
Bisa01g1645 406 CDD DnaJ 20 74 IPR001623 -
Bisa01g1645 406 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Bisa01g1645 406 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 404 - -
Bisa01g1645 406 Pfam DnaJ domain 20 82 IPR001623 -
Bisa01g1645 406 MobiDBLite consensus disorder prediction 359 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1645 Bisa-ChrBisa01 28208482 28212331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1645 18 83 C2H2 Transcription Factor Family AT1G74250 40.845 1.70e-09 57.8