Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1596 ATGACGAAAGGAGAGAGTGAGTACAAGAAGGGGCTATGGACTGAGGAGGAAGACAGGATTTTGATTGAATACATTAGGGTCCATGGGAGAAGACAGTGGAATCGCATCCCTAAACTCACTGGGTTAATGAGGAATGGGAAGAGCTGCAGGTTAAGATGGCTCAACTATCTCAGCCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTAGACTCCATAATCTCCTTGGAAACAGGTGGTCTCTGATAGCAGGGAGGGTGCCAGGAAGAACAGACAACCAAGTGAAGAACCATTGGAACACTCATTTGTGCAAGAAGCTTGGTTTAAATAAGCAATCTGGAAAACTCAGAGACAAAGCACCCTCAAAACCAATGGCTTCTCCACACGTGGAAGGGACTCGCAATGACATGACTTTGGATTCCGTGCCTTCTGATTCTCGCGAAGATAAAGAGGCTGAAGTATTAGACGGCCAAAGAAACTATTTAGATAATATTTGTGTGGAAGCCGTGGATGGAGCTCAACATTGGCCAGCAGGTGAATCAGGAATCATAAAAGACAACTTTGATCAGAGTTTCATGTTTGAATTTGATATTGGTCACAATTTTGTTCTGGATAGTCCTCCAGCTCCGGGGTTAATGGAACTTTTTGATGGCTTTGACATATTATAG 684 0.4357 MTKGESEYKKGLWTEEEDRILIEYIRVHGRRQWNRIPKLTGLMRNGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGLNKQSGKLRDKAPSKPMASPHVEGTRNDMTLDSVPSDSREDKEAEVLDGQRNYLDNICVEAVDGAQHWPAGESGIIKDNFDQSFMFEFDIGHNFVLDSPPAPGLMELFDGFDIL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1596 227 Gene3D - 3 63 - -
Bisa01g1596 227 CDD SANT 65 108 IPR001005 -
Bisa01g1596 227 FunFam Transcription factor WER 64 134 - -
Bisa01g1596 227 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bisa01g1596 227 FunFam MYB-related transcription factor 9 62 - -
Bisa01g1596 227 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Bisa01g1596 227 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Bisa01g1596 227 CDD SANT 13 57 IPR001005 -
Bisa01g1596 227 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Bisa01g1596 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Bisa01g1596 227 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 138 - -
Bisa01g1596 227 Gene3D - 64 134 - -
Bisa01g1596 227 SMART sant 62 110 IPR001005 -
Bisa01g1596 227 SMART sant 9 59 IPR001005 -
Bisa01g1596 227 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Bisa01g1596 227 MobiDBLite consensus disorder prediction 117 159 - -
Bisa01g1596 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1596 Bisa-ChrBisa01 27260623 27263226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1596 5 209 MYB Transcription Factor Family AT5G40330 45.622 8.76e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1596 Myb_DNA-binding 4e-14 CL0123