Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1590 ATGATAGAATCGGAAATGGCTGCTGGCCATGGGAAGCAAGAAGGTTCTACGTCGAAAAATGGATCGCCCCCTTCTAAGTCAGACGATGATTTGGAAAAGGATCCCCTGCAGCAAGATGGAATGCCGTCGCCGTCACCAACGTCGGATTACGCTAAGGCTCCGCCACCAAAGTTCGAGAAGGAAGAGGCTCCATCACCAAAGTCCGCGAAGTATGATGCTCCATTACCAAAGTCTGATGATTCAAACTCCGCGGGAAGTCCTCCACCGGAGACATCGTCAAAGCGGCCACAGTCTACCCAGCCTCCGTCAAGTTCACTGTCGCCGGAAAGATCACCTCCCAAGAAATCACTTTCGCCTCCATCTCCCCCTCCCCCACCGTTAACGCCACCACCTTCGTTTCCGTCTTCGCCTCCGCCTCCCCCACCACTAACGCCACCACCTTCGTTTCCGTCTTCGCCACCACCTTCGTCGTCCTCTTCGCTTCCGCCTCCTCCACCGCCAACGCCAACGCCATCGCCACCACCCTCACCATCTTCGAATGATCATGATGGTCAGTCCTCTATTGGTCGCTCTAAAAAGTCGCCACCACCATCAAAAGCACCAGCCCCGTCGGAATCACCCTCCAGTACTACATCCTCTAGCAAATCACCGCCACCACCGAAGTCACAGAACCACCCGCCGCCACCAACGCTGGATCTTCCTTCACCGCCGCACTCGCCACACCATTCCGTTACCTCCCCTGCAAGACCAAAGGGTTCTCCTGATGGCTCCTCGCCGTCAAAGTCAGAAGGCAGGGACGGTGATGTAGGAATGTACGTTGGTATTGCATTGGGCGCAGTCGTCGTCGTTGCCTTTGTTGCTATATGTATTTTGATTGCGGTTATAAGGAAGAAAAAACAAGCGGCCGTCCATGATGTACCTTATACGCCTCGTCCTAGGGAAGCAGGTGTTGACGGGCATTACTACAAAATTGGCAGTCCAAAAGTAGGAACTGTACACCCTTTGGGAACTCCAGAGGCAGTAACGCCCAAGAGTGGCCAGACAGCTTTTAGCTATGAAAGTATCATGGAGATAACAAATGGGTTTTCTTGTCAAAACGTTATAGGGGAGGGGGGATTTGGATGCGTTTACAGGGGTTGGCTGACAGATGGAAAAGCAGTAGCAGTCAAGAAGCTGAAGGCTGCAAGTGGGCAAGGCGATCGGGAATTTAGGGCGGAAGTGGAGACTATCAGCCGTGTTCATCATCGGCATTTGGTATCCTTAGTCGGTTATTGCATAGCTGAGCAGCAAAAAATGCTTATCTATGAGTTTCTTGCCAATGGAAATCTCGAACAACACTTGCATGGAAAAGGAAGGCCAGTGTTGGATTGGACCAAGAGGGTGAAAATAGCGATTGGTGCTGCAAGAGGCCTGGCATATTTGCATGAAGATTGCTACCCAAAAATTATCCACAGAGATATTAAGTCAGCAAACATACTTTTGGATGATGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTATCCGATGATGCTAATACTCATGTATCAACTCGGGTCATGGGAACCTTCGGGTATCTGGCTCCAGAGTATGCAACAAGTGGAAAATTAACAGATAAATCAGATGTTTTTTCCTTCGGAGTTGTCCTCCTAGAACTTGTAACTGGAAGGAAACCTGTTGATCAAACTCAGCCATTGGGAGAAGAGAGTTTGGTTGAATGGGCTCGACCTCTTCTCATTCATGCAGTTGTGACTGGTGACTTAAGCAAACTAATAGACCCAAGGATTGAGAATCATTATGTGGAGAGGGAAATGCTTAGAATGATTGAAGCAGCAGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCCCGGATGTCTCAGGTCGTAAGAGCCTTAGACAGTGACGGTGAAATTGACCTATCTAATGGGATGAAATATGGTCAGAGCACCATTTATACTTCTGGACAGTATGATGAAGAGATTTTGAGATTTAAGATGATGAATGGTAGCATGAGCTTTGGCAGTTCTGAATTTGATATGTATAGCAGAGATTACGGTTCAAGAGAGTTTTCTGGATTCCGACATTCACGCGATGAGTCACGGTCTCCAAAGCATGGGAGAAGTAGATCATCGATGGATCACTGA 2154 0.4903 MIESEMAAGHGKQEGSTSKNGSPPSKSDDDLEKDPLQQDGMPSPSPTSDYAKAPPPKFEKEEAPSPKSAKYDAPLPKSDDSNSAGSPPPETSSKRPQSTQPPSSSLSPERSPPKKSLSPPSPPPPPLTPPPSFPSSPPPPPPLTPPPSFPSSPPPSSSSSLPPPPPPTPTPSPPPSPSSNDHDGQSSIGRSKKSPPPSKAPAPSESPSSTTSSSKSPPPPKSQNHPPPPTLDLPSPPHSPHHSVTSPARPKGSPDGSSPSKSEGRDGDVGMYVGIALGAVVVVAFVAICILIAVIRKKKQAAVHDVPYTPRPREAGVDGHYYKIGSPKVGTVHPLGTPEAVTPKSGQTAFSYESIMEITNGFSCQNVIGEGGFGCVYRGWLTDGKAVAVKKLKAASGQGDREFRAEVETISRVHHRHLVSLVGYCIAEQQKMLIYEFLANGNLEQHLHGKGRPVLDWTKRVKIAIGAARGLAYLHEDCYPKIIHRDIKSANILLDDAYEAQVADFGLARLSDDANTHVSTRVMGTFGYLAPEYATSGKLTDKSDVFSFGVVLLELVTGRKPVDQTQPLGEESLVEWARPLLIHAVVTGDLSKLIDPRIENHYVEREMLRMIEAAAACVRHSAPKRPRMSQVVRALDSDGEIDLSNGMKYGQSTIYTSGQYDEEILRFKMMNGSMSFGSSEFDMYSRDYGSREFSGFRHSRDESRSPKHGRSRSSMDH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1590 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Bisa01g1590 717 ProSiteProfiles Protein kinase domain profile. 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1590 717 MobiDBLite consensus disorder prediction 219 243 - -
Bisa01g1590 717 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Bisa01g1590 717 SMART serkin_6 362 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1590 717 MobiDBLite consensus disorder prediction 113 178 - -
Bisa01g1590 717 FunFam Proline-rich receptor-like protein kinase PERK8 336 437 - -
Bisa01g1590 717 MobiDBLite consensus disorder prediction 204 218 - -
Bisa01g1590 717 Gene3D Phosphorylase Kinase; domain 1 334 437 - -
Bisa01g1590 717 MobiDBLite consensus disorder prediction 693 717 - -
Bisa01g1590 717 SUPERFAMILY Protein kinase-like (PK-like) 341 635 IPR011009 -
Bisa01g1590 717 FunFam proline-rich receptor-like protein kinase PERK8 438 649 - -
Bisa01g1590 717 MobiDBLite consensus disorder prediction 1 265 - -
Bisa01g1590 717 MobiDBLite consensus disorder prediction 179 193 - -
Bisa01g1590 717 Pfam Protein tyrosine and serine/threonine kinase 364 634 IPR001245 GO:0004672|GO:0006468
Bisa01g1590 717 CDD STKc_IRAK 368 636 - -
Bisa01g1590 717 PRINTS Proline rich extensin signature 134 150 - -
Bisa01g1590 717 PRINTS Proline rich extensin signature 113 134 - -
Bisa01g1590 717 PRINTS Proline rich extensin signature 73 89 - -
Bisa01g1590 717 PRINTS Proline rich extensin signature 54 66 - -
Bisa01g1590 717 PRINTS Proline rich extensin signature 101 113 - -
Bisa01g1590 717 Gene3D Transferase(Phosphotransferase) domain 1 438 648 - -
Bisa01g1590 717 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 279 671 IPR047117 -
Bisa01g1590 717 MobiDBLite consensus disorder prediction 79 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1590 Bisa-ChrBisa01 27159138 27163967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1590 122 688 Trihelix Transcription Factor Family AT1G70460 52.736 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa01g1590 PK_Tyr_Ser-Thr 3.2e-48 CL0016