Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1575 ATGTCAGCACTTACCCATCTTTTCGACTTTCAAGAACAGATATTTTACGTGCAATGCGGATTCTGCACCACCATTTTAGTGGTCAGTGTCCCATGCAGCAGTTTGTCAATGGTGGTGACAGTGAAGTGTGGGCTGTGCACTAGCCTCCTCTCTGTTGATATGAACAAAGCTTCCATTACTCATCTCCAGCCCAAACAAGGTGGGAATCCAGATGAAGATGCAAGCAAGACTCGTTCTGATCATGAGGAAGATGATAGAATTCCAATAAGCTATGTCATTAATAAATGAGATAAAGAGGACTGTAGCCAAACACAGCAACTTGTGGATGCAATGCAATCACATGTGGACCCATATAATGATGCTGAGGAGGCAATAGAGTTCCTGTTGCTCAGTGCTTAA 399 0.4336 MSALTHLFDFQEQIFYVQCGFCTTILVVSVPCSSLSMVVTVKCGLCTSLLSVDMNKASITHLQPKQGGNPDEDASKTRSDHEEDDRIPISYVINKXDKEDCSQTQQLVDAMQSHVDPYNDAEEAIEFLLLSA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1575 132 MobiDBLite consensus disorder prediction 60 86 - -
Bisa01g1575 132 MobiDBLite consensus disorder prediction 71 86 - -
Bisa01g1575 132 Pfam YABBY protein 11 93 IPR006780 GO:0007275
Bisa01g1575 132 PANTHER PROTEIN YABBY 6-RELATED 8 95 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1575 Bisa-ChrBisa01 26923588 26927633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1575 2 59 C2C2-YABBY Transcription Factor Family AT1G23420 70.690 3.47e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa01g1575 YABBY 2e-22 CL0114