Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1573 ATGTGGGGCATCTCTGCATCTGATGCTATGGATGAGGTGACTTGGTCTGCTAAGCCCAAAGGGCTAACAAACCCTCGTCTAGTGCGAGCCCACCCTACCTCAGATCCCAATCAGTCCAAAAACTCATGGACCCCTAAAATTTGGGCCCTTGAAAAAGCCCATCATTGCCAAGTCCAATTAAGTTTCTCCCGGACGCCGCAACCCCATCGATCCTCACGAACCCGCCTTTCACCAAATCGTCAATCCCCTAACCCTAAACACCCACCACAGACCACAGTATATAAGCTTCCATTGCCATCTTTTTCAGGCTCTCAATTGAAACCATCAATAGGCGACACGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTCGAGGTTGAGTCTTCGGACACCATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTAGCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTTGTGCTCCGTCTCCGTGGTGGAGCCAAGAAGCGTAAGAAGAAGACCTACACCAAGCCCAAGAAGATCAAGCACAAAAAGAAGAAGGTGAAGCTCGCCGTGCTCCAATTTTACAAGGTGGATGATTCAGGTAAGGTCCAGCGGCTCAGGAAGGAATGCCCAAATGCTGAGTGTGGGGCTGGGACTTTCATGGCCAACCACTTCGATCGCCATTACTGTGGCAAGTGTGGAATGACTTATGTCTATCAAAAGGCCGGCGGTGACTAG 810 0.5148 MWGISASDAMDEVTWSAKPKGLTNPRLVRAHPTSDPNQSKNSWTPKIWALEKAHHCQVQLSFSRTPQPHRSSRTRLSPNRQSPNPKHPPQTTVYKLPLPSFSGSQLKPSIGDTMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGMTYVYQKAGGD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1573 269 MobiDBLite consensus disorder prediction 1 42 - -
Bisa01g1573 269 ProSitePatterns Ubiquitin domain signature. 140 165 IPR019954 -
Bisa01g1573 269 Pfam Ribosomal protein S27a 215 260 IPR002906 GO:0003735|GO:0005840|GO:0006412
Bisa01g1573 269 PRINTS Ubiquitin signature 124 144 IPR019956 -
Bisa01g1573 269 PRINTS Ubiquitin signature 145 165 IPR019956 -
Bisa01g1573 269 PRINTS Ubiquitin signature 166 187 IPR019956 -
Bisa01g1573 269 Gene3D - 194 267 IPR038582 -
Bisa01g1573 269 Gene3D - 114 193 - -
Bisa01g1573 269 ProSiteProfiles Ubiquitin domain profile. 114 189 IPR000626 GO:0005515
Bisa01g1573 269 Pfam Ubiquitin family 116 187 IPR000626 GO:0005515
Bisa01g1573 269 MobiDBLite consensus disorder prediction 62 94 - -
Bisa01g1573 269 FunFam Ubiquitin-40S ribosomal protein S27a 114 192 - -
Bisa01g1573 269 SUPERFAMILY Zn-binding ribosomal proteins 213 266 IPR011332 GO:0006412
Bisa01g1573 269 PANTHER UBIQUITIN 114 202 - -
Bisa01g1573 269 SMART Ribosomal_S27_2 215 260 IPR002906 GO:0003735|GO:0005840|GO:0006412
Bisa01g1573 269 CDD Ubl_ubiquitin 114 189 - -
Bisa01g1573 269 SMART ubq_7 114 185 IPR000626 GO:0005515
Bisa01g1573 269 SUPERFAMILY Ubiquitin-like 99 190 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1573 Bisa-ChrBisa01 26905028 26906736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1573 114 267 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 95.455 9.89e-91 264