Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1566 ATGGAGATTTCTAGTTCAGTTTTCTGGCTTCTGGGTTTGCTGCTTCTGGCGTTGACGGAGATGTCTTTTGCCGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATAAAAAACGAATTACGTGATCCCCACAGTGTCCTGGACAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGCTCCCCAGATGGCTACGTTTCTGCTTTGGGATTGCCCAGTCAGAACTTGTCTGGTAAGCTATCTCCTGGGATTGGAAACCTGACGAATTTGCAATCTGTGTTGCTTCAGAACAATGCCATTTCTGGTCCAATTCCTGCTGCTATAGGAAAGCTCGAGAAGCTTCAGACACTTGATCTTTCCAATAATGCATTTACTGGGGAGATACCTAGTTCTCTGGGGAGCCTCCAGAACCTGAATTATCTGAAGTTGAATAATAACAGCCTTTCAGGAGCATTCCCTCAGTCTCTTGGCAATATTGAAGGCCTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGGTCGCTGCCAAGAATATCAGCAAGAACATTCAAGATTCTGGGAAATCCTTTAATTTGTGGTCCAAGTGCTAATAACTGCTCTAATGTTCTGCCGGAGCCACTTTCCTTCCCACCAGATTCTTTAAGAGCACAATCAGCCTCTGGAACAAAAGGTCATCATATGGCAGTTGCCTTTGGAGCAAGTTTTGGAGGTGCTTTTGTCATTGTGATTATAGCTGTATTTGTTGTTTGGTTGCGGTATAGACGCAGCAAACAGATATTCTTTGACGTTAATGAGCAATATGACCCAGAGGTCCGCCTTGGCCATTTGAGAAGGTATACATTCAAAGAGCTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTTGGAAGGGGTGGCTTTGGAATAGTCTACAAGGGATGTTTCAGTGATGGCTCTGTGGTGGCGGTTAAAAGGTTAAAGGACTATAATGCTGGTGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACCATAAGTTTGGCTGTCCACCGGAATCTCCTGAGACTTTGCGGGTTTTGCAGCACGCAGAATGAAAGGCTCCTTGTTTATCCATACATGCCCAATGGCAGTGTAGCTTCTCGATTAAAAGATCATATTCATGGGCGACCAGCCTTAGACTGGGCAAGGAGGAAGAAAATAGCATTGGGTACAGCAAGGGGTTTGGTTTATTTGCACGAGCAATGTGACCCTAAAATCATTCACCGTGATGTTAAGGCAGCCAACATCCTTTTGGATGAAGACTTTGAAGCAGTTGTTGGTGATTTCGGTTTGGCAAAGCTTCTGGATCACAGAGAATCTCATGTGACTACTGCAGTGCGTGGCACTGTTGGTCATATTGCTCCAGAATACCTATGCACAGGTCAGTCATCAGAAAAGACAGATGTCTTTGGATTTGGAATCTTGCTGCTCGAGCTTATTACAGGTCATAAGGCTTTGGATTTTGGACGAGCAGCAAATCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCATCAGGATGGAAGATTAAATCAAATGGTTGATAAAGATTTGAAGGGCAACTTTGATCCAGATGAACTGGAAGAAATGGTTCAGGTTGCACTCTTGTGCACTCAATTTAATCCTTTGCACCGACCCAAGATGTCGGAAGTACTGAAGATGTTGGAAGGTGACGGCTTAGCCGAGAGGTGGGAAGAAGCTTCACAGAAGTCAGAGACACCAAGACATAGATCTTGTGAGAACCCTCCTCAAAGATATTCTGATTTTATAGAAGAGTCGTCACTCATATTAGAAGCTATGGAACTTTCTGGCCCTAGGTGA 1881 0.4402 MEISSSVFWLLGLLLLALTEMSFAALSPSGINYEVVALMAIKNELRDPHSVLDSWDINSVDPCSWRMITCSPDGYVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGPIPAAIGKLEKLQTLDLSNNAFTGEIPSSLGSLQNLNYLKLNNNSLSGAFPQSLGNIEGLTLVDLSYNNLSGSLPRISARTFKILGNPLICGPSANNCSNVLPEPLSFPPDSLRAQSASGTKGHHMAVAFGASFGGAFVIVIIAVFVVWLRYRRSKQIFFDVNEQYDPEVRLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGCFSDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKDHIHGRPALDWARRKKIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLCTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLNQMVDKDLKGNFDPDELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQKSETPRHRSCENPPQRYSDFIEESSLILEAMELSGPR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1566 626 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Bisa01g1566 626 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Bisa01g1566 626 Gene3D Transferase(Phosphotransferase) domain 1 379 594 - -
Bisa01g1566 626 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Bisa01g1566 626 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bisa01g1566 626 SUPERFAMILY L domain-like 32 204 - -
Bisa01g1566 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Bisa01g1566 626 FunFam Somatic embryogenesis receptor kinase 1 271 378 - -
Bisa01g1566 626 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1566 626 FunFam Somatic embryogenesis receptor-like kinase 1 379 596 - -
Bisa01g1566 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 212 - -
Bisa01g1566 626 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Bisa01g1566 626 MobiDBLite consensus disorder prediction 586 602 - -
Bisa01g1566 626 ProSiteProfiles Protein kinase domain profile. 302 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1566 626 MobiDBLite consensus disorder prediction 586 605 - -
Bisa01g1566 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 586 - -
Bisa01g1566 626 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1566 Bisa-ChrBisa01 26818440 26823080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1566 67 626 Receptor kinase-like Gene Family AT1G60800 75.439 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa01g1566 Pkinase 2.2e-43 CL0016