LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g1559	ATGGAAGTCCAGGATTCTGGTATTGAATCTCAACAAAAGAGTAGGTTCGCGCTTCCTGTGGATTCTGAACACAAAGCCACTGAATTCAGATTATTCTCAGTGGCTAAACCCCACATGCGAGCCTTCCATCTGTCCTGGATTTCTTTCTTCTCATGTTTTGTGTCTAGTTTTGCAGCACCCCCTCTTGTTCCCATAATTCGTGATAACCTCAACCTCACGGCCACAGACATTGGAAATGCTGGGATTGCATCAGTCTCAGGAGCAGTTTTTGCTCGAATTGCAATGGGTACAGCCTGTGACTTATTCGGACCCCGTCTTGCCTCTGCCTCCATCATCCTCCTCACAGCACCAGCAGTCTACTTCACTTCCATTATCTCATCTGCTACCTCCTTCCTACTCGTCCGCTTCTTCACAGGCTTCTCCTTGGCCACTTTTGTGTCAACCCAGTTCTGGATGAGCTCTATGTTTTCTTCTAAAGTCGTTGGTTCAGCCAATGGGATTGCAGCTGGGTGGGGCAACCTCGGAGGAGGAGCCACGCAGCTTCTTATGCCTGTTGTGTTCGCAATAATCCGTGATATTGGAGCTGTCAAATTCACAGCATGGCGAATTGCGTTCTTCATCCCTGCAGTGTTTCAGATGTTAACAGCATTTGCTATACTAATATTTGGCCAGGATTTGCCAGATGGCAACTTCCATGTCTTGAAGAAATCAGGGGAAAAGGCAAAAGATGACTTCTCACGAGTGCTATTCTACGGGATTACAAATTACAGAGGGTGGATTCTGGCTCTGACTTATGGCTATTGCTTTGGGGTGGAGCTAACGATAGACAATATCATAGCTGAATACTTCTATGATAGATTCGATCTACAACTTCAAACAGCAGGAATAATTGCTGCAAGTTTTGGATTAGCTAATGTGGTTTCACGACCTGCAGGAGGATACATATCAGATATAATGGCAAAGAAGTTCGGAATGAGGGGTAGGCTATGGGCCTTGTGGCTCTGCCAAACCTTGGGAGGTGTATTCTGCATAATCCTTGGCAGGGTGGGATCTCTAGGTGTTTCCATCCTTGTCATGATCATATTCTCTATATTTGTTCAAGCTGCATGTGGGCTTACATTTGGAGTGGTTCCTTTTGTCTCAAGAAGGTCACTGGGAGTTATATCTGGAATGACAGGAGGTGGAGGAAATGTGGGTGCAGTTTTGACCCAGCTGATTTTCTTCAAAGGATCCAGATATTCAAAAGAAAGAGGGATAACCCTGATGGGTGTGATGATCATAGTGTGCACCCTCCCAATATTATTAATCTACTTCCCACAATGGGGTGGGATGTTTTGCGGTCCATCATCTGAAAAGGTGGCAGAAGAAGATTACTACATGTCCGAGTGGAACTCAAAGGAGCAGGAGAAAGGCTCTCATCACGCAAGCTTGAAATTTGCAGATAACAGCAGAGGTGAAAGAGGCAGATTTTCCTCTACAACTTCTGATGAAGTCACACCACAGAATGCTTGA	1512	0.4544	MEVQDSGIESQQKSRFALPVDSEHKATEFRLFSVAKPHMRAFHLSWISFFSCFVSSFAAPPLVPIIRDNLNLTATDIGNAGIASVSGAVFARIAMGTACDLFGPRLASASIILLTAPAVYFTSIISSATSFLLVRFFTGFSLATFVSTQFWMSSMFSSKVVGSANGIAAGWGNLGGGATQLLMPVVFAIIRDIGAVKFTAWRIAFFIPAVFQMLTAFAILIFGQDLPDGNFHVLKKSGEKAKDDFSRVLFYGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFDLQLQTAGIIAASFGLANVVSRPAGGYISDIMAKKFGMRGRLWALWLCQTLGGVFCIILGRVGSLGVSILVMIIFSIFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFKGSRYSKERGITLMGVMIIVCTLPILLIYFPQWGGMFCGPSSEKVAEEDYYMSEWNSKEQEKGSHHASLKFADNSRGERGRFSSTTSDEVTPQNA	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g1559	503	Gene3D	MFS general substrate transporter like domains	33	230	IPR036259	-
	Bisa01g1559	503	CDD	MFS_NRT2_like	42	435	IPR044772	GO:0015112
	Bisa01g1559	503	SUPERFAMILY	MFS general substrate transporter	31	437	IPR036259	-
	Bisa01g1559	503	Pfam	Major Facilitator Superfamily	46	402	IPR011701	GO:0022857\|GO:0055085
	Bisa01g1559	503	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	41	441	IPR020846	GO:0022857
	Bisa01g1559	503	MobiDBLite	consensus disorder prediction	466	503	-	-
	Bisa01g1559	503	MobiDBLite	consensus disorder prediction	486	503	-	-
	Bisa01g1559	503	FunFam	High affinity nitrate transporter 2.5	34	230	-	-
	Bisa01g1559	503	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	7	490	IPR044772	GO:0015112
	Bisa01g1559	503	Gene3D	MFS general substrate transporter like domains	241	442	IPR036259	-
	Bisa01g1559	503	MobiDBLite	consensus disorder prediction	466	485	-	-
	Bisa01g1559	503	FunFam	Nitrate transporter 2.1	242	443	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g1559	Bisa-ChrBisa01	26652896	26654855	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g1559	1	493	Inorganic Solute Cotransporters	AT1G12940	74.297	0.0	771