Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1544 ATGGCTCTGCTACTTGGTGGCGCTCAGCCTCAGTTACTATGTTCCATTCGTCATGGTCATAGAAAACCTTGTATCGGAGCTTCTCACAGACGCTTCCATTTCGCCGATGATACTAGAATTCGGATTGTTCTGTCCACTCCTCCCTTCCATCCCGGACACATTCTTTTGAGCCCTCCAAAATCAGGGTCCATAGATGGGATTTCTGTTCAGAACAATTCAGAAGCTCTAGGTGAAGACCATAAGAGGGAAGAAAAAGAAGAAGATGAAGAGTTTTTGAAGAGGCTTAGAAGATGGTTCAGTGTTCTTCCCTCGATTTTGCCTGGGGGAAGCTGGTGGGACTTCTCCGAAGATGTCGAGGTTCGGGATTTAGCAAAGCCCGTCACTGTGTGGTGTGCGCTTGGCAAAATGTGGCAACTCATTGCTCATGACCGATGGGTCATTTTCGCTGCATTCTCTGCTCTGATTCTCGCAGCGGTTTCGGAGATTTCCATACCACATTTCTTAACAGCGTCCATTTTCTCCGCACAGGGTGCGGAAATTACAGTTTTCCGTCGGAATGTGCTTCTCTTGGTTCTGTTCTGCATAACGTCGGGAATATGCAGTGGGATACGAGGCTGCCTTTTTGGAATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATATTCCTCCCTTGTTCTTCAGGATATATCATTTTTTGACGATGCAACAGTTGGTGATCTGACAAGTAGGCTTGGGGCTGATTGTCAACAAGTTTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAACAGGTGCATTAGCCTACTTGCTAGTTTTGTCTTGGCCACTTGGTTTATTTACATTGACAATATGCTCTATATTATCAGCAGTATTACTACTTTATGGAAGGTACCAGAAAAAGGCTGCGAAGTTGATCCAAGAAGTCATTGCTTCTGCAAATGAAGTAGCTCAAGAGACATTCTCTCTGATTAGGACTGTTCGTGTTTATGGAACCGAAGAAGAAGAACTTGGAAGGTACAAATGGTGGCTGGGGAAGTTGGCTGACATAAGCTTGCGACAAAGTGCTGCATATGGGGTTTGGAATTTCAGCTTCAACAATCTCTACCATTCAACTCAGGTTATCGCCGTGCTGTTTGGAGGAATGTCTATTCTAGCAGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGAGACAGTATATCCTCTTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTATTCCATTTGATGGATCTCACACCTAGCAGCCAATTCACGGCGAAAGGAGTGAAGTTGCAGAGGTTGACGGGGCACATTGAATTTGTAAATGTATCATTTCACTATCCTTCAAGGCCTACGGCATCTGTAGTGCAGCACATAAGCTTTGTTGTCCATCCTGGTGAGGTGGTTGCAATTGCTGGTCTTAGTGGCAGTGGAAAAAGCACCCTGGTGAACCTTTTGCTTCGTCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCATTCCACTTAAAGAGTTGGACATTATGTGGTGGAGAGAAAGAATTGGATTTGTGGGGCAGGAACCTAAGCTCTTCAGAATGGATATTAGTTCCAACATCAGATATGGATGCACTCGAGATATAAAGCAAGAGGATGTTGAATGGGCTGCAGAGCAGGCTTATGCTCATGATTTCATCTTAGCACTTCCTAATGGTTATGAAACACTTGTTGACGATGATTTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGGGCCATCCTAAGGGATCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAATGTTAAGGGAGTTGTTCGATCTGTCAGAAGTGACTCCTTGACAAGGAGAAGTGTCATAGTCATTGCACACAGACTTTCTACCATACAAGCAGCAGACAGGATTGTGGTAATGGATGGCGGTCAAATTGCTGAGATTGGAACTCACAGGGAACTTCTCTTAAAAGATGGCTTGTATGCTCGATTGACCAATAAACAAGCTGACTCCTGGGGCAAGCAACTTTTTTCAACTGCTGACCCATTTATTCATAATATTAAATAA 2172 0.4342 MALLLGGAQPQLLCSIRHGHRKPCIGASHRRFHFADDTRIRIVLSTPPFHPGHILLSPPKSGSIDGISVQNNSEALGEDHKREEKEEDEEFLKRLRRWFSVLPSILPGGSWWDFSEDVEVRDLAKPVTVWCALGKMWQLIAHDRWVIFAAFSALILAAVSEISIPHFLTASIFSAQGAEITVFRRNVLLLVLFCITSGICSGIRGCLFGIANMILVKRMRETLYSSLVLQDISFFDDATVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALAYLLVLSWPLGLFTLTICSILSAVLLLYGRYQKKAAKLIQEVIASANEVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGVWNFSFNNLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFHLMDLTPSSQFTAKGVKLQRLTGHIEFVNVSFHYPSRPTASVVQHISFVVHPGEVVAIAGLSGSGKSTLVNLLLRLYEPTNGQILIDGIPLKELDIMWWRERIGFVGQEPKLFRMDISSNIRYGCTRDIKQEDVEWAAEQAYAHDFILALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVVRSVRSDSLTRRSVIVIAHRLSTIQAADRIVVMDGGQIAEIGTHRELLLKDGLYARLTNKQADSWGKQLFSTADPFIHNIK 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1544 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 703 IPR027417 -
Bisa01g1544 723 FunFam ABC transporter B family member 26, chloroplastic 129 448 - -
Bisa01g1544 723 ProSitePatterns ABC transporters family signature. 601 615 IPR017871 GO:0005524|GO:0016887
Bisa01g1544 723 Gene3D ABC transporter type 1, transmembrane domain 131 449 IPR036640 GO:0005524|GO:0016020
Bisa01g1544 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 463 702 IPR003439 GO:0005524
Bisa01g1544 723 Pfam ABC transporter transmembrane region 149 414 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa01g1544 723 FunFam Multidrug ABC transporter ATP-binding protein 455 707 - -
Bisa01g1544 723 CDD ABC_6TM_TAP 150 437 - -
Bisa01g1544 723 SMART AAA_5 490 679 IPR003593 GO:0016887
Bisa01g1544 723 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 148 429 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa01g1544 723 Gene3D - 453 711 IPR027417 -
Bisa01g1544 723 PANTHER ABC TRANSPORTER B FAMILY 138 701 IPR039421 -
Bisa01g1544 723 Pfam ABC transporter 482 629 IPR003439 GO:0005524
Bisa01g1544 723 SUPERFAMILY ABC transporter transmembrane region 136 445 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1544 Bisa-ChrBisa01 26269354 26275070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1544 218 703 Calmodulin-binding Proteins AT2G36910 33.737 3.98e-72 253