Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1539 ATGGAAGAAGCCCTCAGGAGGCTCAACGGTCTCGCTCCGATTCCCGAACCCGACCCTCACGACCCTCTCTCAGACCACCACAAGAAGTGCGCCACCACCGCCGCCACCAAGAGGACTGTCAGAGAGACCGGAGGGTCCGGCGGCACCATGAGGTATCGAGGAGTCAGGCGAAGGCCCTGGGGCCGTTACGCGGCGGAGATAAGGGACCCGCAGTCGAAGGAGCGGCGGTGGCTCGGGACCTTCGACACGGCGGAGGAAGCCGCCTGCGCTTATGACTGCGCCGCTCGAGCCTTGCGGGGACTCAAGGCTCGCACCAATTTCGTGTACCCAACTTCCCCTCCTCACGCTACACCCACCGAGCATCTCTTCCCTCATGTCGCTTTTCCCAAACATTCTCAGCATCAAATTAACAAGAACGTTAACCCCCATAACCGCCATTTGGGCTGGCCGCCTTCTTTCCCAAACCCTCATGTCGGTGATTTCTCTGCACCCGGTAATTCCGCGACTAGCCAGTGTAATTCTGCACTCAACATGCTTCTCTTTCATGACTACCTTAATTCCTCTCCAAACCCTTCTTTGGTTTCTTCTTCTCAGCAGTTTTATAACCCCTTATCCTACAACAAGGTCGGCACTTGTTCCTGTTCTACGGTATCCCTAAACACTTCTAGTTGTGTTCCAGTATGCTGTCTGGTGAATTCCTCTGGTGGCAATTCGGTGAATACTCAACAGAATTGTGGCACCAAAGTTACTGAAGTTGAAGGGGACTCGGAATTCTTTCCGAGAGAATCATCAGACTCTGGGTTGTTGCAAGAGATAGTGCATAGGTTCTTGCCAAAAACATCGAAGCCCGAACATTGCGAGAGCGCTCAGCCGAAAACAGAGGCTTTGTCTCTGTCTCTGTCTACCCCACAGTCACAGTTGCTTCCTCCTCAGCCTGTGTCTGGTGATCATCGCGCCATGTTAGCTTCCGCTACTGCTCTTTGCTACGACAGTACCATTACGAAGAAGGGAGTGACTAAGAATGAAGATTTTGGAGTGTGTTCTGATCACCAGGGTTTTTTCCCCATGCAGCAATTTGACAGCTTCAATAGTGGGAACAACACGGCCCAAGTTATACCATTAAGGAACGATCACCACTTGATGATGAGTGATGCAGAGTACTCCATCTTAGGAGACATCTTTCAGTACCCGGAGCTGCTTAATGAATTTGCAGCCAGGATGCAAAATGCTTGA 1233 0.5182 MEEALRRLNGLAPIPEPDPHDPLSDHHKKCATTAATKRTVRETGGSGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARALRGLKARTNFVYPTSPPHATPTEHLFPHVAFPKHSQHQINKNVNPHNRHLGWPPSFPNPHVGDFSAPGNSATSQCNSALNMLLFHDYLNSSPNPSLVSSSQQFYNPLSYNKVGTCSCSTVSLNTSSCVPVCCLVNSSGGNSVNTQQNCGTKVTEVEGDSEFFPRESSDSGLLQEIVHRFLPKTSKPEHCESAQPKTEALSLSLSTPQSQLLPPQPVSGDHRAMLASATALCYDSTITKKGVTKNEDFGVCSDHQGFFPMQQFDSFNSGNNTAQVIPLRNDHHLMMSDAEYSILGDIFQYPELLNEFAARMQNA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1539 410 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Bisa01g1539 410 MobiDBLite consensus disorder prediction 1 53 - -
Bisa01g1539 410 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Bisa01g1539 410 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Bisa01g1539 410 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Bisa01g1539 410 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Bisa01g1539 410 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Bisa01g1539 410 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Bisa01g1539 410 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
Bisa01g1539 410 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 240 - -
Bisa01g1539 410 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1539 Bisa-ChrBisa01 26155060 26156292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1539 1 279 AP2-EREBP Transcription Factor Family AT1G12980 37.801 4.67e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1539 AP2 5.5e-12 CL0081