Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1527 ATGGAGCCAGAAAAGCGCACCGGCGGATCCGGACCCGGACCCGAAACATTGCGCAACCTCGCTCTGTGCGCCTCTCTTCTTCGTCTACGAAACTTCACCAGATGCCGCGAGTTCGCTCTTCAAATATCACGATCCGACCCAAAGATCTCCGACACCGCCGACCGAATACTCGCAATCGCCGACGTCCACATCGCCTCCGAGCGCCGCCTTAGTAACAACCAGTTCGACTGGTACTCTATTCTCCAACTCCGCCGTATGGACTCTGGAAACCACCAGCTCATACGGAATCAATTTAAGAGGCTGGCGCACCTCTTGAACCCAAACAGAAATGAGTATGCACTTGCAAACGAAGCCTTCTTGCTAGTACGCGACGCGTGGCTCGTGCTTTCGGACCCAGAAAAGAGAGCCAAGTACGAACAGGCGATTGGCAATCCGGTACCCCAAGAACATCGCAAACAGAGTGGTGAGAGCAAGCAAGAGGGTTCTCGGGATGTGCCGAGAAATGGGCACAATGTAAATGTGGGTGAACCGAAGGCCTCATTTTGGACTGTCTGTCCTTATTGCTGGGGTTTATTCGAGTACGAGAAGATATACGAAGACTGCTCTTTGCGGTGCCAGAAATGCAGAAAGGTATTTCATGGGATAACGGTGCCGCCTCCGGAGAAGGACATGCTAGTAACGGGGAAGGAGCAATACTACTGCTATTGCGCGCATATGCCTCTAAGGTACCAGCAGTCGCAACATTCAATCAACATATCAAAGCACTGGGGTATGGCAGATAGGAGTAATAATGGAAGTGTGTTTGTTGATATTCCTGGTTATGATGTTGGTAATTTATCGAAGAACTTCGGAATCGGAGAAGAGGAAAGGGTTTTTCATCCAGAGCAAGCAGGGAATGAGGGATTGCATGAAGATTTGGGAAATGGGAAGCGGCGGATGAGGGTTAAAACTGTGGCTAGAAATACAAAGAAGATGACTGGGAACAGAATGAGATATCAAGGACGTATTTCGCCGAATTTAGATGCAGAAGATGGTTACATGGAATTTTCAGAAGAAGAAGCAGATGTCTTTGTCAGTGTACAATTTGAGAAAGTGAAGCAAATATCTGCTTATGACTTATACAATCTTTTACAGAAAGCAAGTCAGTTCGATTCAATGGTTTATCTTCGACAGGGCATGCAGCAACTTCGAAATTACTGCAACTCAGAACCTAACATGTTAAGAACTATCTCAGATACATACAAGAAGTCATTTTTAAAACCAAAATCAAAGGCAGAGACCAAAATACTCGCTGCTAAGAAACACAGTGAAGCAGAGAAGAGACGGAGGATGCGAATCAATGGTCAATATGCCACCCTCCGCACCATCCTTCCCAACTTGGTCAAAATGGACAAGGCGTCAGTACTGGCGGAGACTATAAGGCAAGTGAAGGAGCTGAAGAAGAATGTATCAGAACTGGAAGCAGCTAGCAGTGGGAGCTCAGTTGAGATGACTGTGTTTCCCAATGGGGCAGACAAGTTGAACTTAGAACACTGTAATGATGAGCAGGGCCTCATGAAGGCCACAATGAGTTGTGAGGATAGGCCGGGGTTGATGTCAGCCATCACGAGGTTGCTTGGATCGGTGGAAGCCAAGGTGGTGAAGGCTGAGATGGTGACTGTGGGAGGGAGAACCAGAAATGTGTTATGGGTGAAAGGGCTGGGGAATGGAAAAGAAGGGATGGGGATACTGAAGAGGACTCTGAAGGTTGTCATGCACAGGCCGACCTTTAAGATGCAGCGTCTGACTCAATAG 1794 0.4783 MEPEKRTGGSGPGPETLRNLALCASLLRLRNFTRCREFALQISRSDPKISDTADRILAIADVHIASERRLSNNQFDWYSILQLRRMDSGNHQLIRNQFKRLAHLLNPNRNEYALANEAFLLVRDAWLVLSDPEKRAKYEQAIGNPVPQEHRKQSGESKQEGSRDVPRNGHNVNVGEPKASFWTVCPYCWGLFEYEKIYEDCSLRCQKCRKVFHGITVPPPEKDMLVTGKEQYYCYCAHMPLRYQQSQHSINISKHWGMADRSNNGSVFVDIPGYDVGNLSKNFGIGEEERVFHPEQAGNEGLHEDLGNGKRRMRVKTVARNTKKMTGNRMRYQGRISPNLDAEDGYMEFSEEEADVFVSVQFEKVKQISAYDLYNLLQKASQFDSMVYLRQGMQQLRNYCNSEPNMLRTISDTYKKSFLKPKSKAETKILAAKKHSEAEKRRRMRINGQYATLRTILPNLVKMDKASVLAETIRQVKELKKNVSELEAASSGSSVEMTVFPNGADKLNLEHCNDEQGLMKATMSCEDRPGLMSAITRLLGSVEAKVVKAEMVTVGGRTRNVLWVKGLGNGKEGMGILKRTLKVVMHRPTFKMQRLTQ 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1527 597 ProSiteProfiles dnaJ domain profile. 76 142 IPR001623 -
Bisa01g1527 597 CDD DnaJ 76 131 IPR001623 -
Bisa01g1527 597 SUPERFAMILY Chaperone J-domain 70 142 IPR036869 -
Bisa01g1527 597 Pfam DnaJ domain 76 139 IPR001623 -
Bisa01g1527 597 Gene3D DnaJ domain 59 159 IPR036869 -
Bisa01g1527 597 Pfam Helix-loop-helix DNA-binding domain 434 479 IPR011598 GO:0046983
Bisa01g1527 597 SUPERFAMILY ACT-like 522 585 IPR045865 -
Bisa01g1527 597 SMART finulus 436 485 IPR011598 GO:0046983
Bisa01g1527 597 Coils Coil 469 489 - -
Bisa01g1527 597 Gene3D - 428 489 IPR036638 GO:0046983
Bisa01g1527 597 CDD ACT_UUR-ACR-like 522 572 - -
Bisa01g1527 597 CDD PHD_SF 184 234 - -
Bisa01g1527 597 MobiDBLite consensus disorder prediction 140 171 - -
Bisa01g1527 597 MobiDBLite consensus disorder prediction 151 165 - -
Bisa01g1527 597 SMART dnaj_3 75 134 IPR001623 -
Bisa01g1527 597 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 430 479 IPR011598 GO:0046983
Bisa01g1527 597 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 325 - -
Bisa01g1527 597 CDD bHLH_AtAIG1_like 426 486 - -
Bisa01g1527 597 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 434 496 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1527 Bisa-ChrBisa01 25888981 25893392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1527 26 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.662 3.55e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1527 DnaJ 7.6e-11 CL0392