Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1517 ATGGCTTTTCCCGGTTCTCTGCAGCTGTCCCATGATTTGGGGCATTGCAGGAACCTGGGCTGCAATAAACAACAACATATGAGGAATATGTACAGAAGCAAATTACATTTATGGAGTGCAGCTCCCTCATATCGGGTTTCGTTCCTGAAACAGGGTTGCTGGAGGAGTCAAGTCTTTTGCAATGTAAATAGGCCAATACATACCTTATCTTGCAAATCCCATAAGTGCCACTTTTTTCTGGTACCAGGCCAACCAAGTGAACTACCTATTATTAAGGTGGCTGCCACAGCGCTGGCAAGGTCCTATAATCTTGTACAAAATAGTCCTGTCACAGTAAAGTTGATTTCAGCAGTTGGCATTATCATTTTCGCAGTATGGGGTGTTGGCCCAGTAATGTATCACACAAGAAAACTGCTTCTTCAGAGGAGCGACAGTAGTTGGAAGAAAAGTAGAACACATTATGTAGTAACTTCTTACCTTCGGCCATTCCTTTTATGGGCTGGAGCTATACTTATTTGCAGAGCATTTGACCCAGTAATTTTACCTTCAGAAGCAGCCCAGGTTGTCAAGGGACGGCTTTTGAATTTTGTACGATCATTGACAACTGTACTTACCCTTGCCTATTGTTTATCAAGTGTGATTCAGCAAGCACAGAAATTCTTCATGGAGAGTGCTGATGGCTGTGAGACAAGGAATATGGGATTCCAATTTGCGGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTTTCGTTGTTCATGGAGTTGCTCGGATTTTCTACTCAGAAGTGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGCTGACTCTTGCTGGTCGTGAGATATTTACCAACTTCCTTTCAAGTGCGATGATTCATGCAACTCGGCCTTTTGTGGTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCAACAATTATAAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAGTTCACAGTGAACGTTGTGCGAAACCTTAGTCAAAAAACACATTGGCGCATCAAGACCCACCTAGCTATTAGTCATTTGGATGCAAATAAGATAAATAACATTGTTGCTGACATGCGGAAAGTGTTAGCCAAAAATCCTCAAGTTGAGCAGCAGAAGCTGCACAGGAGAGTGTTTCTGGACAATATAAATCCTGAAAATCAGGCTCTTATGATACTGGTGTCTTGTTTTGTGAAGACCTCACATTACGAAGAATATTTATGTGTGAAGGAAACTATACTACTCGATCTTCTTAGGGTTATTAGCCATCACCGAGCCCGACTTGCGACACCAATTCGTACTCTGCAGAAAACTTATAGAGATGCTGAGTTGGAGAACATGCCACGCATGGATTCTGTATTTGTTGGTGCTGGAACGGTACCAAACCGTTCGATAATAATAGAACCACCTTACAAAATCACTGCAGATGATACAGCAAAAGGCCGATCAGTGCGCACATCTGGTGAAGGGGATAACAAGACAACCGCCAAACGTGACACCAAGACAGACCCCAAGGTAGAACCGATAGTGGTGCCAGATGCTAAGGTCAGTGAAACTGATTCCAAAGAAGATGCTAAAGCTGTGTCGTCTAATTCTGATGCAAATGGAACCCCCAAGATTTCAGTGACAACCATACCTAATCCTGGAGTGTGTGAAAATGAGCCAATAAAAGTGGAGTCAAATACTACCTTAAAGGAAAATCTGGAGGTGCCAGGTATGTCTGCTTCCAACTCCAAAGTGAGTGAACCGGTATTAGATAACGTGACCCAGAAGAATTTCAATGTCAAACAATCCAAGGATGCTGACAAAGGCAGTGCACGTCCTACGAGTGTGCCATCGAAACAGCAAGATGAAAGGAAACCAGGGACACAGCCTCAAACGTCCATGCCTGTCCTGAAAGAAAATATAGTACTCGGGGTAGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGAGGAGGGGATGGACTCAACTACTACTCCAGAGGCGAAAGAAATGGCTGCATCTCATGGTGGAAATAGATCTTCAATGGCTGAGGATGGGAGAGATAGGTAA 2121 0.4371 MAFPGSLQLSHDLGHCRNLGCNKQQHMRNMYRSKLHLWSAAPSYRVSFLKQGCWRSQVFCNVNRPIHTLSCKSHKCHFFLVPGQPSELPIIKVAATALARSYNLVQNSPVTVKLISAVGIIIFAVWGVGPVMYHTRKLLLQRSDSSWKKSRTHYVVTSYLRPFLLWAGAILICRAFDPVILPSEAAQVVKGRLLNFVRSLTTVLTLAYCLSSVIQQAQKFFMESADGCETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDANKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNINPENQALMILVSCFVKTSHYEEYLCVKETILLDLLRVISHHRARLATPIRTLQKTYRDAELENMPRMDSVFVGAGTVPNRSIIIEPPYKITADDTAKGRSVRTSGEGDNKTTAKRDTKTDPKVEPIVVPDAKVSETDSKEDAKAVSSNSDANGTPKISVTTIPNPGVCENEPIKVESNTTLKENLEVPGMSASNSKVSEPVLDNVTQKNFNVKQSKDADKGSARPTSVPSKQQDERKPGTQPQTSMPVLKENIVLGVALEGSKRTLPIEEGMDSTTTPEAKEMAASHGGNRSSMAEDGRDR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1517 706 MobiDBLite consensus disorder prediction 550 570 - -
Bisa01g1517 706 MobiDBLite consensus disorder prediction 500 530 - -
Bisa01g1517 706 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Bisa01g1517 706 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Bisa01g1517 706 MobiDBLite consensus disorder prediction 591 617 - -
Bisa01g1517 706 Gene3D - 299 354 IPR023408 -
Bisa01g1517 706 Gene3D - 195 297 - -
Bisa01g1517 706 MobiDBLite consensus disorder prediction 630 653 - -
Bisa01g1517 706 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 692 IPR045042 -
Bisa01g1517 706 MobiDBLite consensus disorder prediction 591 706 - -
Bisa01g1517 706 MobiDBLite consensus disorder prediction 498 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1517 Bisa-ChrBisa01 25784006 25792565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1517 9 701 Mechanosensitive Ion Channel Family AT5G10490 53.495 0.0 692