Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1506 ATGGCTCGGGCTACTAACTGGCTACCGTTTTCGCTGTCGCCGATGGAAATGTTGAGGTCCTCCGACTCGCAGTTTGTTCAATACGACAGTGTGGCTGCTACTCCTCACTACTTCGTCGACAACTTATATGCCAATGGCTGGACTAACCCCAAAACCCAGGTACTGTACACCCAAGTAGAGCAAAACCAAAGCAAAGAAAACGAACAGGCACAGAACATGGGGGAATCATCATTTCTCACGGGCTTCATGGAACCCCAAAATCAGAGCCATCCAGTGCCGAAACTTGAGGACTTCTTGGGTGATTCTTCATCTTCCATGATGCGTTACTCCGATAGCCAGACGGATACCCAAGATTCGTCGACCCTGACTCATATATACGATCAGGGATCGGCCTACTACAGCGACCAGCAAGATCTGAAAGCAATTGCTGGGTTCCAAGCTTTTTCCACTAACTCGGGCTCCGAAGTGGATGACTCGGCCTCAATCGCCAAAACTCAGGCTACCTGCGGCGAGTTCGTGGCTCACTCTATTGAGTCATCCGGGAACGAGTTGGCCTTTTCTAGTGGCGCCACCGGCACCCTCTCTCTCGGTGTCGCACAATGTTCTGATAAGAAGGCCATTGCTCCCGCAAATACCGATAGCTCAAAGAAGATCGCCGATACTTTTGGCCAGCGAACTTCAATTTACAGAGGAGTCACAAGACACCGATGGACGGGTAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGAAGAGAGGGCCAGGCGAGGAAAGGGCGTCAAGGCGGATATGATAAGGAAGAAAAGGCCGCAAGAGCATATGATTTGGCAGCCCTCAAATATTGGGGCCCCACTGCTACCACCAACTTCCCTGTTTCCAATTATACGAAGGAATTAGAGGAGATGAAACATGTAACAAAGCAAGAATTTATTGCATCACTACGAAGGAAAAGTAGCGGATTTTCCAGGGGAGCTTCTATATACAGGGGTGTAACAAGGCATCACCAACAGGGAAGATGGCAAGCAAGAATTGGTCGTGTTGCAGGGAATAAAGATCTATACCTTGGAACGTTTGCTACAGAAGAGGAAGCAGCAGAGGCATACGACATTGCAGCCATAAAGTTCAGGGGTGCAAATGCTGTAACCAACTTTGAGATGAATAGATATGATGTTGAAGCCATCATGAAGAGTTCTCTTCCCATTGGTGGGGCAGCAAAACGCTTGAAGCTTTCTCTAGAATCACAGCAGAAAGCAGCTCTGAACAATAATCAGCAAATTCAATGTGCAAACGTGAGCAACAGCATCAACTTTTCACCCATTCAGACAGTTGCTTCGTCTATCCCTTGTGCAATTCCATTTGATCCTGCTGCTGCATATTATCACCACAACCTCCTCCAACATTTTCAGCCTTCCAACACTGGTACTGCAGAGTCTGCTATGTCCAACCTTTCTGCAACAGCATTGACTGCTCTGCCTTCTGCAGCTGCTGAGTTTTTTATATGGCCTTCCCATCAGTCCTATTGA 1524 0.479 MARATNWLPFSLSPMEMLRSSDSQFVQYDSVAATPHYFVDNLYANGWTNPKTQVLYTQVEQNQSKENEQAQNMGESSFLTGFMEPQNQSHPVPKLEDFLGDSSSSMMRYSDSQTDTQDSSTLTHIYDQGSAYYSDQQDLKAIAGFQAFSTNSGSEVDDSASIAKTQATCGEFVAHSIESSGNELAFSSGATGTLSLGVAQCSDKKAIAPANTDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPIGGAAKRLKLSLESQQKAALNNNQQIQCANVSNSINFSPIQTVASSIPCAIPFDPAAAYYHHNLLQHFQPSNTGTAESAMSNLSATALTALPSAAAEFFIWPSHQSY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1506 507 Pfam AP2 domain 327 377 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 Pfam AP2 domain 228 283 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 86 425 - -
Bisa01g1506 507 CDD AP2 326 385 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 ProSiteProfiles AP2/ERF domain profile. 228 291 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 SUPERFAMILY DNA-binding domain 326 386 IPR016177 GO:0003677
Bisa01g1506 507 Gene3D AP2/ERF domain 327 387 IPR036955 GO:0003700|GO:0006355
Bisa01g1506 507 Gene3D AP2/ERF domain 228 293 IPR036955 GO:0003700|GO:0006355
Bisa01g1506 507 SMART rav1_2 228 297 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 SMART rav1_2 327 391 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 SUPERFAMILY DNA-binding domain 227 293 IPR016177 GO:0003677
Bisa01g1506 507 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 PRINTS Ethylene responsive element binding protein signature 367 387 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 FunFam AP2-like ethylene-responsive transcription factor 326 387 - -
Bisa01g1506 507 FunFam AP2-like ethylene-responsive transcription factor ANT 227 293 - -
Bisa01g1506 507 CDD AP2 227 293 IPR001471 GO:0003700|GO:0006355
Bisa01g1506 507 ProSiteProfiles AP2/ERF domain profile. 327 385 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1506 Bisa-ChrBisa01 25563329 25567733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1506 47 507 AP2-EREBP Transcription Factor Family AT5G10510 57.770 4.94e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa01g1506 AP2 1.8e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2172 11 45395625 45401311 Bisa01g1506 01 25563329 25567733 CCT