Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1493 ATGTCACCGGAAAATAATCCTCCTTCGAAGCCTGCTGCCGCGAAGGACGACAATAGCCAGGGCTCCGGCGGCCGGAAAACCACATCAGCGAGGCCCCCAGAACAAGGCCTCAAGTGTCCCAGATGTGACTCGCCCAACACCAAATTCTGCTACTACAACAATTACAGCTTGACGCAGCCGAGGCATTTCTGCAAGACGTGTCGGAGGTACTGGACAAAAGGCGGAGCTTTACGCAACGTCCCCATTGGCGGCGGCTGCAGGAAGAACAAGAAGGTGAAGTCCTCGTCGTCGTCAAGGCTCTCCGGTGACTCCAAGGACTCCGGCTTCCCTTCGGAGCTCGGTGGCTTCAAGTTCTTCCACGGCCTTTCCCCTTCCATGGATTTTCACCTTGGTGGGTCCTTGCCTTTCCCTAGACTTCACCACCACCCTCCAGCCATCTATAACCCAATCTCTTCCTTTGGGGATGTTCAAGCAGCCACCTTTGATCCGTCTGGCAGCTCAAATTCTATGATTAATTTCAATTACCCATCAACAGGAGGAGGAGGAGGGTTTAGTGGTGTAATTCAGGGTATGAGCTCTATGAACGTTAACAGTAGCCTCGCTTCTTCAATTGAGTCATTGAGCTCTGTGAACCAGGACCTGCACTGGAAGCTACAGCAACAGAGGTTAGCGATGTTGTTTGGTGGTGATGATAATAACCAGAAAGATGAGGGAGTTTCAGCGGTTAATCTTGAGAACCAGACCCAAAAGCCACAACCCATTTTGTTTCAGAATCTTGAGATCTCAAAGCCTGAGATTTGCCCGGTTGGTGGTAGCTTGAGAAAAGAAGATACACCAACAGAGTGGTTCTTTGGGAATTCTTTTGCTTCAGTGACTCCTACGCCTACTAGCACCAGCAGTGGTGGGAATAATGGCCATGATAATGCAACCAATAACTGGAGTACTGGTGTTCATGCTTGGGGTGATGTGCAGCACCAATATAATGCTTTGCCCTAG 996 0.502 MSPENNPPSKPAAAKDDNSQGSGGRKTTSARPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSSSSRLSGDSKDSGFPSELGGFKFFHGLSPSMDFHLGGSLPFPRLHHHPPAIYNPISSFGDVQAATFDPSGSSNSMINFNYPSTGGGGGFSGVIQGMSSMNVNSSLASSIESLSSVNQDLHWKLQQQRLAMLFGGDDNNQKDEGVSAVNLENQTQKPQPILFQNLEISKPEICPVGGSLRKEDTPTEWFFGNSFASVTPTPTSTSSGGNNGHDNATNNWSTGVHAWGDVQHQYNALP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1493 331 MobiDBLite consensus disorder prediction 12 29 - -
Bisa01g1493 331 MobiDBLite consensus disorder prediction 82 106 - -
Bisa01g1493 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 222 IPR045174 GO:0003700|GO:0006355
Bisa01g1493 331 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Bisa01g1493 331 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Bisa01g1493 331 MobiDBLite consensus disorder prediction 1 39 - -
Bisa01g1493 331 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1493 Bisa-ChrBisa01 25246446 25247441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1493 1 331 C2C2-Dof Transcription Factor Family AT5G65590 41.690 7.72e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa01g1493 zf-Dof 1.2e-32 No_clan