Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1481 ATGGCGACGCAGCATGAGACGGAGCATCCCAGGAAGGCTTTCGGATGGGCTGCTAGGGATAAATCTGGTGTTCTCTCTCCTTTCAACTTCTCTAGAAGGGAAACGGGAGAGAAGGACGTGAGACTCAAAGTGCAGTATTGCGGGATATGCCACTCTGACCTTCACGTGATTAAGGATGACATGAATTATACAACCTTCCCCGTTGTACCTGGGCATGAAATTGTTGGCGAAGTGACAGAGGTGGGAAGCAAGGTACAAAAATTCAAAGTTGGAGACAGGGTAGGCGTGGGATGCTTCGTGTGGTCCTGCCGCTCATGCCAAAACTGTACTGACAATCTTGAGAGTTACTGCCCACAAGTGGCTTACACATACGGTGCCAAGAATGTCGATGGCACCATGACATACGGAGGCTACTCTGACTCCATGGTTGCAGATGAGCATTATGTGGTCCGAGTTCCAGATAGCCTACCTCTTGATGCTGCTGCTCCTCTCCTCTGTGCTGGGATTACTGTGTATAGCCCTTTGAGGTATTTTGGACTAGACAAACCTGGTCTTCATATTGGTGTGGTTGGTCTGGGTGGGCTTGGCCATATGGTTGTAAAGTTTGCTAAGGCTTTTGGCGCTAAGGTAACAGTAATCAGTACATCTCCTAACAAGAAGCAGGAAGCAATAGAACGTCTAGAAGCTGACTCTTTTGTGGTCAGCCATGAGCAAGATCAGATGCAGGCTGCAATGGGCACTATGGACGGTATCATTGACACTGTTTCGGCTGTTCATCCTCTCTTGCCTTTGATTGGTCTGCTCAAATCTCATGGGAAAATTGTAATGCTTGGTGCCATAGGCAAGCCAGTAGAGCTGCATCCCCTTTACTTAGTTATGGCTTGCACTGCCTTATCATTTGACAATCGAAATAGAAAACGTGAAGCTAATCAGTATTCCACGTTCTTTACAGGAAGGAAGTTAGTAGCTGGAAGTTGCATAGGTGGGTTGAAGGAGACTCAAGAAATGCTTGATTTTGCTGCCAATCACAATGTCAAACCTGACATTGAGGTTATTCCAATAGATTATGTGAACAAAGCATTGGAGCGCCTTGAAAAAGCAGATGTGAAGTATCGATTTGTCATTGACATTGGGAACACACTGAAGCCAAGCTCTTAA 1158 0.4629 MATQHETEHPRKAFGWAARDKSGVLSPFNFSRRETGEKDVRLKVQYCGICHSDLHVIKDDMNYTTFPVVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCFVWSCRSCQNCTDNLESYCPQVAYTYGAKNVDGTMTYGGYSDSMVADEHYVVRVPDSLPLDAAAPLLCAGITVYSPLRYFGLDKPGLHIGVVGLGGLGHMVVKFAKAFGAKVTVISTSPNKKQEAIERLEADSFVVSHEQDQMQAAMGTMDGIIDTVSAVHPLLPLIGLLKSHGKIVMLGAIGKPVELHPLYLVMACTALSFDNRNRKREANQYSTFFTGRKLVAGSCIGGLKETQEMLDFAANHNVKPDIEVIPIDYVNKALERLEKADVKYRFVIDIGNTLKPSS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1481 385 FunFam Cinnamyl alcohol dehydrogenase 167 302 - -
Bisa01g1481 385 FunFam Putative cinnamyl alcohol dehydrogenase 6 348 377 - -
Bisa01g1481 385 Pfam Alcohol dehydrogenase GroES-like domain 38 152 IPR013154 -
Bisa01g1481 385 Gene3D - 17 376 - -
Bisa01g1481 385 CDD CAD1 14 376 IPR047109 GO:0016616
Bisa01g1481 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 345 IPR036291 -
Bisa01g1481 385 SMART PKS_ER_names_mod 23 375 IPR020843 GO:0016491
Bisa01g1481 385 PANTHER ALDEHYDE REDUCTASE 5 380 IPR047109 GO:0016616
Bisa01g1481 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bisa01g1481 385 FunFam Uncharacterized protein 16 166 - -
Bisa01g1481 385 SUPERFAMILY GroES-like 19 184 IPR011032 -
Bisa01g1481 385 Gene3D - 167 347 - -
Bisa01g1481 385 Pfam Zinc-binding dehydrogenase 194 293 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1481 Bisa-ChrBisa01 24946960 24948608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1481 11 384 Monolignol Biosynthesis Gene Families AT4G37990 63.369 7.00e-157 444