Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1459 ATGGAGCTTACCCAACTTGGGTTTCTGGAGGAACTGCTAGCTCCAAGAAGAGACACTTGGAATACTATGTCCACTGGGTTAAGCGAGCTACTCCCTAGTGCCGCTTGGAGCTTTGAATGTTTTGAAGAGAATGCTGCAGCTACCTTTAATCCAACATTTTCTTCATTTCCCACACCAATATTGGACCATAAATTTGAGTGCTCCTACCCATCTCTTGATGGCTTCACAGGGAATGATGACTCCGCACCACCGCTTCAGCCGCAGGAAGATGAAGAGCTCGGCTTTCTGGGTTTTGAAGATCACAATTCTGAGGAAAGACATGACAACAATAATATTAGTAGCTGCAAGATTGAGGAAAAAGCACCGGAGGTTCCAGTGTTCAACATGGGTTTGTGCTGTGGAGAGAAGAAGCCTAAATCCAAGAAGCTAGAAGGGCAACCCTCCAAGAATCTCATGGCAGAAAGAAGAAGAAGAAAGCGCCTCAATGACCGGTTGTCCATGCTGAGATCAATAGTCCCTAAGATCAGCAAGATGGACAGGACCTCTATTCTTGGAGACACCATAGATTACGTGAAAGAGCTTCTGGAACGGATAGTAAAGTTGCAAGAAGAAATGGAGGAGGAGGAGGGTGGAAATAATCAGATAAACCTCTTGGGTATTTCCAAGGAGGTGAAGCCAAATGAAGTAATGGTGAGAAACTCCCCCAAGTTTGAGGTTGAAAGGAAAGATCAGAACACCAGAATCAACATCTGCTGTGCCACAAAGCCTGGATTGTTACTGTCAACAGTAAACACCTTAGAATCATTGGGACTTGAGATTCACCAATGTGTTATAAGCAGCTTCAATGATTTCTCTATGCAAGCATCTTGCTCAGAGGAGACTGAGCAGAGAAGTTGTATTAGCTCTGAGGACATAAAGGAATCACTATTCAGAAATGCAGGTTATGGTGGGAGATGTCTGTAG 963 0.4434 MELTQLGFLEELLAPRRDTWNTMSTGLSELLPSAAWSFECFEENAAATFNPTFSSFPTPILDHKFECSYPSLDGFTGNDDSAPPLQPQEDEELGFLGFEDHNSEERHDNNNISSCKIEEKAPEVPVFNMGLCCGEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELLERIVKLQEEMEEEEGGNNQINLLGISKEVKPNEVMVRNSPKFEVERKDQNTRINICCATKPGLLLSTVNTLESLGLEIHQCVISSFNDFSMQASCSEETEQRSCISSEDIKESLFRNAGYGGRCL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1459 320 Gene3D - 137 210 IPR036638 GO:0046983
Bisa01g1459 320 CDD ACT_UUR-ACR-like 246 287 - -
Bisa01g1459 320 SMART finulus 151 200 IPR011598 GO:0046983
Bisa01g1459 320 Pfam Helix-loop-helix DNA-binding domain 151 194 IPR011598 GO:0046983
Bisa01g1459 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Bisa01g1459 320 Coils Coil 191 211 - -
Bisa01g1459 320 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 73 314 - -
Bisa01g1459 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 211 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1459 Bisa-ChrBisa01 24522528 24523796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1459 56 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 54.307 3.52e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1459 HLH 8.4e-10 No_clan