Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1457 ATGTCGTGCTCACCACCCGGCAAACCCACTTCTAATGCCGCTTTCTTGTCCCCCCCTTCTCCCTTCTTTTTCTTAACCCCCACTCCATTATGTATTTCTATTTTGATTTCCTTTCTCACCCTCGCTCTTTTATCTCATTTCCCATCTTACCCCTCCCCTCACTTACCCCATTGGTCCGCTAACCGGGCCCTAGCCCCGGTGCTTCCAACCCCAGGGCAAACGCGACATTTACGCGTACGCCGGCTTCGACCAGAAACCGGCTTCGGCTTTTGGGTCTATCGCACTCATACCCGCCTCTTCGTTAGTTTGTATATTGGGAGTCTGATGTCTCCACCAGTGCTGCTTGCCAACGATCAAGGGGAGAGCAACGCCTCCACAGTAACATCTTCACCTTCTTTGGATTGTATCTCCCACACTGGGACTGGATTAAAAGAACGCAATTACCTAGGGTTGTCAGATTGCTCATCAGTGGACAGCTCTACTGTTCCAAGCTTGTCAGACGAGAAAAAAGACAATTTGACTTTAAAGGCCACAGAGTTGAGGCTGGGTCTTCCTGGATCCCAATCTCCTGAAAGGGATACAGATCCGTACTTACTGTGCTCACCAAAACTTGATGAGAAGCAACTGTTTCCTTTGCTTCCTACCAAAGATGGAATCTCCACATCGTCCCTGAAAACTGTGGTTTCAGGCAACAAAAGAGGTTTCTCTGACACCATGGACGGGTTCTCTGAGGGGAAGTTTCCAGGTAATTCAGGAATGAACGTGTTGCTTTCTCCTAGACCTGCTGGGGCTCAGCCAACCACAATGAAAGAAATGCCAACCAAGGTTATACAAGAACGGCCTTGTGCAACTAATGGAACAGGTCATAACTGTACAGATGCTTCTGTCGGTGCCAGTGCACCAGCCTCTAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCGTTCAGGAAGAACACACTGGCTACTACTTCAAAGAACACTGATGAAGTAGATGGAAAACCGAGTCCTGCTGCTCTCTTTGTAAAGGTAAGTATGGATGGAGCTCCCTATCTCAGGAAGGTTGATCTTAGAAATTACACAACATACCAGGATCTGTCATCTGCCCTGGAGAAGATGTTCAGCTGTTTTACCCTCGGTCAGTGTGGTTCCCATGGAACTCCAGGAAGAGAAATGCTGAGTGAGAGCAAGTTAAGGGACCTTCTTCATGGTTCAGAATACGTACTCACTTATGAAGATAAAGATGGTGATTGGATGCTTGTAGGGGATGTACCGTGGGAGATGTTTATTGACACTTGCAAGAGGCTGAAAATAATGAAGGGTTCTGATGCCATTGGCTTAGCTCCTAGGGCCATGGAAAAATCCAAGAGCAGGAGCTAG 1380 0.4775 MSCSPPGKPTSNAAFLSPPSPFFFLTPTPLCISILISFLTLALLSHFPSYPSPHLPHWSANRALAPVLPTPGQTRHLRVRRLRPETGFGFWVYRTHTRLFVSLYIGSLMSPPVLLANDQGESNASTVTSSPSLDCISHTGTGLKERNYLGLSDCSSVDSSTVPSLSDEKKDNLTLKATELRLGLPGSQSPERDTDPYLLCSPKLDEKQLFPLLPTKDGISTSSLKTVVSGNKRGFSDTMDGFSEGKFPGNSGMNVLLSPRPAGAQPTTMKEMPTKVIQERPCATNGTGHNCTDASVGASAPASKAQVVGWPPIRSFRKNTLATTSKNTDEVDGKPSPAALFVKVSMDGAPYLRKVDLRNYTTYQDLSSALEKMFSCFTLGQCGSHGTPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1457 459 Pfam AUX/IAA family 178 450 IPR033389 -
Bisa01g1457 459 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 174 446 IPR003311 GO:0005634|GO:0006355
Bisa01g1457 459 SUPERFAMILY CAD & PB1 domains 336 440 - -
Bisa01g1457 459 ProSiteProfiles PB1 domain profile. 339 443 IPR000270 GO:0005515
Bisa01g1457 459 Gene3D - 335 452 - -
Bisa01g1457 459 FunFam Auxin-responsive protein 334 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1457 Bisa-ChrBisa01 24485518 24490535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1457 341 444 B3 DNA Binding Superfamily AT5G37020 31.731 1.82e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa01g1457 AUX_IAA 4e-90 CL0072