Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1453 ATGCGAGATTATGATAGAGATGATGAGGAACAAGGGGAAGGGAATGAATATGAAAAGAAGGAATATCAGGAGGAAGAAACCCGTAAGCCGACAAAGCAAGAGCTGGAGTATCTTGAATTGAGGCAGAAGTTGAAAGAATCAATCAGAAAGCAGATGAAGAAGGAGAGTAGTTCTTCCCTTGCTGATTCCAGTCAAAGAAAGAAGAAACTTCCGTGCGATAAGTCTTTTTTAGCTGATGTTGAAGAGCCACAACGAGCTAAAGTACCTGTGAAGAGTAAACAACTTCCAAACAATGGGGGCAAGCTTGTTCATGGCAGTTGTGAGGACAGGAAGCCAGTTTCTGTGCCTCGCCAATTGCCTCCTAAATTTGGGTCTAATAATAAGTTAACCTCTAACACTAAGCCCAGAATGACATCAGCAGATACTAGAAAACAACTTGATGGTGTGCAGAAACCACTCCCTTCAAAGGGGCAACCATCTATTCCTAAGCAGAATGTGGTTCGAAGAAAAGACCCAAGAGAATTGAATAAGCCTAAGATAACACGAAAACAACCAGTGGCATCATCAAGAGCTCAGTTAAATAAGCCACTTAAATCAAATCCAACTTGTCCAGCTTCACAAGATCGTCGCCACAGGAAGAGGCCTGTAAAACGGTATTTTTGTGACAAGGACGAGGATGCAAAGGCTATTGGTATGATCAGAAACATGTTCAATTACCGACCGGACAGGTTCGCTGATATTGATGATGATGATATTGGTATGGAGGCAGGGTCTGATGAAATCATGGAGGAGGAAATGAGAAGACTTTTGTTTCCCTTTCATATTCTGCTCACTATTGCCTTACAAAATCTGCTGGTCACATTTGAATGCATGATTTCTGTCATAAAAGTGGTGCTTTTTCCTTTTTGTGTAACGAACAATGGTAAAATTGCCAAGGAGGAGGAAGAAGAGCAACTTAGGCTAATAGAGGAGGAGGAGGAAAGAGAACGCAAAAGACGATTGGCAGAGTTTAAGAAGCGTAAGATTGCTGGGTAGACAGTAAGAGTACATCTTCATGTTTTCAAGAGCTCGATGGGAGACGTGGCTAAGGACCTTGTTGCTGGGACTGTTGGAGGAGCAGCTCAATTAATATGCGGACACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAACCTCCCAAGTATGCTGGTGCCATTGATGCTGTCAAGCAAACAATTGCAGCTGAAGGCCCAGGGGGTTTATACAAAGGTATGGGTGCTCCACTTGCAACGGTAGCTGCCTTCAACGCTGTCCTATTCACGGTGAGGGGACAGATGGAGGCGTTATTGAGATCCCAGCCTGGTGCCCCTCTTACAGTAAACCAGCAGATTGTTTGTGGAGCAGGGGCTGGAGTTGCTGTTTCCTTTCTTGCTTGCCCCACTGAACTGATCAAATGCAGGCTTCAAGCACAAAGTGCACTCGCAGGTTCTGGAACAGCTACAGTGGCTGTTAAGTATGGAGGACCCATGGATGTGGCCAGGCAAGTTCTCCGGTCAGAAGGGGGTGTTAGAGGCCTTTTTAAGGGCTTGGTTCCCACTATGGCGCGTGAAATACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCAATAAAGCAGTTAATTGCAGGAGGTCAAGACACTTCAGGGCTAGGTAGAGGTTCTTTGATTGTTGCCGGAGGCTTGGGCGGAGCTTCTTTCTGGCTCATGGTTTACCCAACTGATGTTGTGAAGAGTGTGATTCAGGTAGATGATCACAAAAATCCAAAGTATGCTGGTACATTGGATGCATTTAGAAAGATTCGAGCTTCAGAGGGGTTCAAAGGCCTGTACAAGGGCTTTGGTCCTGCAATGGCCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCTTATGAGATGACAAGATCAGCTCTGGGGTGA 1965 0.4555 MRDYDRDDEEQGEGNEYEKKEYQEEETRKPTKQELEYLELRQKLKESIRKQMKKESSSSLADSSQRKKKLPCDKSFLADVEEPQRAKVPVKSKQLPNNGGKLVHGSCEDRKPVSVPRQLPPKFGSNNKLTSNTKPRMTSADTRKQLDGVQKPLPSKGQPSIPKQNVVRRKDPRELNKPKITRKQPVASSRAQLNKPLKSNPTCPASQDRRHRKRPVKRYFCDKDEDAKAIGMIRNMFNYRPDRFADIDDDDIGMEAGSDEIMEEEMRRLLFPFHILLTIALQNLLVTFECMISVIKVVLFPFCVTNNGKIAKEEEEEQLRLIEEEEERERKRRLAEFKKRKIAGXTVRVHLHVFKSSMGDVAKDLVAGTVGGAAQLICGHPFDTIKVKLQSQPTPLPGQPPKYAGAIDAVKQTIAAEGPGGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSQPGAPLTVNQQIVCGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTATVAVKYGGPMDVARQVLRSEGGVRGLFKGLVPTMAREIPGNAAMFGVYEAIKQLIAGGQDTSGLGRGSLIVAGGLGGASFWLMVYPTDVVKSVIQVDDHKNPKYAGTLDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1453 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 459 555 IPR018108 -
Bisa01g1453 654 MobiDBLite consensus disorder prediction 120 145 - -
Bisa01g1453 654 MobiDBLite consensus disorder prediction 166 180 - -
Bisa01g1453 654 Pfam Mitochondrial carrier protein 460 557 IPR018108 -
Bisa01g1453 654 Pfam Mitochondrial carrier protein 361 452 IPR018108 -
Bisa01g1453 654 Pfam Mitochondrial carrier protein 571 653 IPR018108 -
Bisa01g1453 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 565 652 IPR018108 -
Bisa01g1453 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 359 450 IPR018108 -
Bisa01g1453 654 SMART spt2 191 335 IPR013256 -
Bisa01g1453 654 MobiDBLite consensus disorder prediction 182 204 - -
Bisa01g1453 654 Coils Coil 311 341 - -
Bisa01g1453 654 SUPERFAMILY Mitochondrial carrier 359 647 IPR023395 -
Bisa01g1453 654 MobiDBLite consensus disorder prediction 1 88 - -
Bisa01g1453 654 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 360 653 - -
Bisa01g1453 654 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 359 653 - -
Bisa01g1453 654 MobiDBLite consensus disorder prediction 1 215 - -
Bisa01g1453 654 Gene3D Mitochondrial carrier domain 354 653 IPR023395 -
Bisa01g1453 654 Pfam SPT2 chromatin protein 222 267 IPR013256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1453 Bisa-ChrBisa01 24310680 24319918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1453 379 653 Antiporters AT1G79900 33.571 1.18e-38 143