Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1446 ATGACAGACTATCGTTCGCCGGCGACGATGAATCTTTGGAGTGATGATAACTCCTCCGTCATGGACGCCTTCATGAGCTCCGATCTATCTACCCTCTGGCCTCCTGCGCCTCAACCCCAATCCTCTGCTTCTACCACCACCACTCCTGGACCTGACCCCTCCAAAGCTCTCTCTCAACCTCAGCCGTCGGTTTGTCTCTTCAATCAGGAGACTCTCCAGCAACGCCTTCTGGCGCTGATTGAGGGAGCCATAGAGAGCTGGACCTACGCTATCTTTTGGCAATACTCGTGTGATTACTCAGGAACCTCTGTGTTGGGTTGGGGCGATGGTTACTACAAAGGCGAGGAAGATAAAGGAAAAGGCAAGGCCAAAACGGCGTTGCCGTCCGCGGCTGAACAGGAGCACCGTAAGAAGGTTCTTCGCGAGCTCAATTCGCTAATCTCCGGCTCATCTGCCTCCCCAGACGAGGCGGTCGACGAAGAAGTAACCGACACCGAGTGGTTCTTTTTGGTTTCAATGACCCAGTCGTTTCTCAACGCCGGCGGATTGCCGGGGCAGGCGTTCTTCAATTCGCACCCCGTGTGGATCACTGGTTCGGAGCGATTGGCGGCTTCGTCGTGCGAGAGGGCGAGGCAGGGTCAGGTGTTTGGGCTTCGGACCATGGTGTGTATACCGTCGCCGAGCGGGGTGGTCGAGTTGGGCTCCACTGATCTGATTTTTCAAAACACCGATCTGATGAATAAGGTCAGGGTTCTGTTCAATTTCAATAGCCCTGAAGGGGGTTCTTCGTGGCCGTTAAATGCTAGTACTACCGATCAAGGTGAGAACGACCCTACGTCACTCTGGCTCAACGATCCTTCTGGCGGAATTGAAATCAGGGATTCGGCGACTACAGTTGCCCACACTTCAGTACCCAGTTCAACTAATAGTCATAACAATAATCAGACAATTGCCAAGTCGATGCAGTTCGATACCCGAGGTTCCAGTACTTTAACTGAAACCCCAGGTGCCCTTCATATCCAAAACGGTCACCATAGTCACCAGCAACAACGGCAACAGCAACAGCCACAGCCGCAATCGACGAACCAGAGTTTCTTTTCAAGGGAATTGAACTTTTCGGACTATGGGTTCGACGGCAACGGCGTGAAGAACGGTAACTCGCATTCCTTGAAGCCGGAATCGGGTGAGGTTTTGAATTTCGGGGAGAGCAAGAAGAATGCTTATAGTGGAAATGGGAACGGCAATTTCTTATCAGGTCAGACTCAATTTGTAGCAGAGGAAAACAAGAAGAGGAGGTCGCCTACGTCCAAGGGTAGCAATGACGAAGGGATGCTTTCCTTCGCGTCGGGCGTGATTTTGCCCACTTCCAATATGAAGTCTAGCGGCGGCGGCGGCGGCGATTCCGACCATTCGGATCTTGAAGCCTCTGTGGCGAAGGAGGTAGACAGCGGGAGAGTGGTTGAGCCAGAGAAAAAACCTCGGAAAAGAGGTCGAAAGCCTGCAAATGGCAGAGAGGAGCCTTTGAATCACGTGGAAGCGGAAAGGCAGAGGAGAGAGAAGCTTAATCAAAGATTCTATGCTCTCCGTGCGGTGGTTCCAAATGTATCAAAGATGGATAAAGCATCCCTTCTGGGTGATGCCATATCTTACATTGATGAGCTCAAGTCGAAGCTTCAGGGTCTAGAATCAGATAAGAATGAATTGCAGAACCAATTGGATTCTGTGAAGAAGGAACTTGAGCTGGCCAGCAAAGGTTCAGGGGCACCTCAATTGGATAGAGAACCGAAGCTGCCCAATCACAATACTAGCAAGCTTATTGATTTGGATATCGACGTGAAGATCATCGGTTGGGATGCGATGATTCGCATCCAATGTAGCAAGAAGAACCACCCTGCAGCGAGGTTGATGGCAGCATTGAAAGAGCTAGACCTGGATGTGCACCACGCGAGTGTGTCGGTGGTGAATGATTTGATGATCCAACAGGCAACGGTGAAGATGGGGAGTCGATTTTACACGCAGGAACAGCTCCGGTTAGCTCTTTCCTCTAAAGTTGGCGATGTCCGGTAG 2067 0.5128 MTDYRSPATMNLWSDDNSSVMDAFMSSDLSTLWPPAPQPQSSASTTTTPGPDPSKALSQPQPSVCLFNQETLQQRLLALIEGAIESWTYAIFWQYSCDYSGTSVLGWGDGYYKGEEDKGKGKAKTALPSAAEQEHRKKVLRELNSLISGSSASPDEAVDEEVTDTEWFFLVSMTQSFLNAGGLPGQAFFNSHPVWITGSERLAASSCERARQGQVFGLRTMVCIPSPSGVVELGSTDLIFQNTDLMNKVRVLFNFNSPEGGSSWPLNASTTDQGENDPTSLWLNDPSGGIEIRDSATTVAHTSVPSSTNSHNNNQTIAKSMQFDTRGSSTLTETPGALHIQNGHHSHQQQRQQQQPQPQSTNQSFFSRELNFSDYGFDGNGVKNGNSHSLKPESGEVLNFGESKKNAYSGNGNGNFLSGQTQFVAEENKKRRSPTSKGSNDEGMLSFASGVILPTSNMKSSGGGGGDSDHSDLEASVAKEVDSGRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIDELKSKLQGLESDKNELQNQLDSVKKELELASKGSGAPQLDREPKLPNHNTSKLIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALKELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALSSKVGDVR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1446 688 MobiDBLite consensus disorder prediction 262 283 - -
Bisa01g1446 688 MobiDBLite consensus disorder prediction 324 363 - -
Bisa01g1446 688 Coils Coil 551 585 - -
Bisa01g1446 688 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 505 554 IPR011598 GO:0046983
Bisa01g1446 688 MobiDBLite consensus disorder prediction 31 60 - -
Bisa01g1446 688 Pfam Helix-loop-helix DNA-binding domain 509 554 IPR011598 GO:0046983
Bisa01g1446 688 MobiDBLite consensus disorder prediction 376 395 - -
Bisa01g1446 688 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 508 575 IPR036638 GO:0046983
Bisa01g1446 688 PANTHER MYC 60 683 IPR045084 GO:0003700|GO:0006355
Bisa01g1446 688 MobiDBLite consensus disorder prediction 454 515 - -
Bisa01g1446 688 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 72 253 IPR025610 -
Bisa01g1446 688 CDD bHLH_AtAIB_like 502 578 - -
Bisa01g1446 688 Gene3D - 504 583 IPR036638 GO:0046983
Bisa01g1446 688 MobiDBLite consensus disorder prediction 472 515 - -
Bisa01g1446 688 MobiDBLite consensus disorder prediction 262 290 - -
Bisa01g1446 688 FunFam Transcription factor bHLH13 498 572 - -
Bisa01g1446 688 SMART finulus 511 560 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1446 Bisa-ChrBisa01 24224771 24226837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1446 1 685 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.556 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1446 bHLH-MYC_N 5.9e-53 CL0161