Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1436 ATGGCGTCTCTTGGAAACCCAAGAAGTTGGGTTCCATACATGAACAGCAAAGACTGTTCACAAGGCTTCTGCAGCTTGTACTGTCCACAGTGGTGTTACATAGTGTACCCTCCTCCTCCTCCTCCTCCCTTTGAATTTCCGGAGGAAAATTCAAGCCCAAATTTTTCTCCTCTCGTCATAGCAATCATCGGGATCTTAGCCAGTGCTTTCCTTCTCGTAAGCTACTACGCACTGATCTCAAAGTACTGTGGCAACACAGAGTCATCACACGTCGAGAGTCACGAGCCTTCAAACGAGGAGGTAGAAGACAATCACAACCCTTCCCTCCACGAACCATGGCACGTGACACCCACTGGCCTAGACGAGGCTCTCATCAAGACCATCACAGTGTGCAAGTACAAGAAAGGAGATGGGTTGGTGGCAGTAGCAGATTGCTCTGTTTGTCTGAGTGAGCTCCAAGAGGGTGAGAGCATTAGGCTATTGCCGAAGTGCAGCCACGCCTTTCACCTCCCTTGTATTGACACCTGGCTCAAATCTCACTCCTCTTGCCCTCTCTGTCGTGCCAGTATCTTCACCTTCAACGCTTCCGGGTTTCAAGTGTTCGATTCGGTGATGGAGAATAATGAAACTTCACCGCACAGTCATCAACATGGGAATGAAAACGATGAAGAGTTCGGTCTGGCGGCGGAAGAAGAAAGTCGAGAAACCGCATGGTGCTGTACGGTAGTTCCGAAGCCTACACTGCGTGCTTTCAGTGACTTAGGGAATTTGGAAGGGAGACACAGCGTGATTGAGATCAGAGATGAAGGGTGGTATGATCGCATTGGAAGATCAGTGTCGATGGACCATTCATTTCAAAGTGGTGTTTCCGTTGCTAATCAAGCAGAAGATGGAGGCTGTGAAGAAGGTGGTGCATCAAAGAGATGGCGAGGAGAATGCAGCAGAATGAACAATAGAAGAAGGGTATTGCACTGTGTGGTGAGTCCAATTGCAATGAAGAGATCGTTTTCGAGTGGGAGATTCTCTCTCACCAGGAATGCCAGAGGAGGAAGGCGAGGACTAATCCCTATCTAA 1074 0.4888 MASLGNPRSWVPYMNSKDCSQGFCSLYCPQWCYIVYPPPPPPPFEFPEENSSPNFSPLVIAIIGILASAFLLVSYYALISKYCGNTESSHVESHEPSNEEVEDNHNPSLHEPWHVTPTGLDEALIKTITVCKYKKGDGLVAVADCSVCLSELQEGESIRLLPKCSHAFHLPCIDTWLKSHSSCPLCRASIFTFNASGFQVFDSVMENNETSPHSHQHGNENDEEFGLAAEEESRETAWCCTVVPKPTLRAFSDLGNLEGRHSVIEIRDEGWYDRIGRSVSMDHSFQSGVSVANQAEDGGCEEGGASKRWRGECSRMNNRRRVLHCVVSPIAMKRSFSSGRFSLTRNARGGRRGLIPI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1436 357 CDD RING-H2_EL5-like 144 187 - -
Bisa01g1436 357 PANTHER RING-H2 FINGER PROTEIN ATL16 43 230 IPR044600 GO:0016567|GO:0016740
Bisa01g1436 357 MobiDBLite consensus disorder prediction 92 109 - -
Bisa01g1436 357 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Bisa01g1436 357 SUPERFAMILY RING/U-box 144 192 - -
Bisa01g1436 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 194 IPR013083 -
Bisa01g1436 357 FunFam RING-H2 finger protein ATL54 120 193 - -
Bisa01g1436 357 MobiDBLite consensus disorder prediction 90 111 - -
Bisa01g1436 357 SMART ring_2 145 186 IPR001841 -
Bisa01g1436 357 Pfam Ring finger domain 144 187 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1436 Bisa-ChrBisa01 24074282 24075355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1436 1 335 C3H Transcription Factor Family AT3G03550 41.160 1.94e-67 214