Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1427 ATGGGAAGGCCACCATGTTGCGAGGAGAGCGGGGTGAAGAGAGGGCCATGGACACCTGAAGAAGATGAAAAGCTTATGAATTATATCAGCAAACATGGGAGTGGCAATTGGAGAACAGTTCCAAAGCATGCAGGCCTCAACAGGTGTGGCAAGAGCTGCAGGCTAAGATGGACAAACTATCTTAGGCCTGACATTAAGAGAGGCAAATTCACCGAAGAAGAAGAACAATTGATCATCAACCTTCATTCTGTTCTTGGAAACAAGTGGTCAAAGATTGCAACCCATCTTCCAGGACGAACGGATAATGAAATAAAGAATTTATGGAACACCCACATAAGGAAGAAACTTCTCCAGATGGGTATCGACCCAGAAACCCATAAACCAAGAACAGATATGAAGCACCTCATGAATTTGGCGCAGTTGCTTGGGATCTCAAATAATAATAACTTGATGAGCCCTTGGGGCAATCCTCTTCTTGGTTTGCAGCAGACGGATGCGACTCAGTTAGCCCAGTTCCAACTATTACAGAATCTTTTGCAGCTTATAAATGACAATTCATCATCTGTTAATATGGGGAATCATCACAGCCTCATGAATAACCCACTTGAAGCATATCTAAATGGGACAAACACTAGTGGCCTCATGAAAGGCCAAGAGTTATATGGGAACCCAGCTTTATTCCTTCCATCACCAAGTGATTCCCAGCAGGATATTTCAAAACCATGGACAGACTTAGAAGGTGGATCAAATCCACAAGCTGTTGCTTTTAACAATAATAGTTGTATTTACAGCACTCCATCACATTCACATGAAACTAATAAAGTAGAAAACACACTTCCCGCTTTAGTTTCAGCCTCTCCTGGAAGTGGCACCTTGAACCAAATGGAGAGTAGCTCTAATAATACAGATCAGATGTTCACTCACTCAACTTCTTCCTCTATCTCTGATGCTTGGGAGAAGATCTTGGAAGATGACACTAGCGATTCATGCTGGAAAGAACTTCTAGACTTGACATCCACTTCTGCATCCCTGATTTCGTGGTAG 1044 0.4272 MGRPPCCEESGVKRGPWTPEEDEKLMNYISKHGSGNWRTVPKHAGLNRCGKSCRLRWTNYLRPDIKRGKFTEEEEQLIINLHSVLGNKWSKIATHLPGRTDNEIKNLWNTHIRKKLLQMGIDPETHKPRTDMKHLMNLAQLLGISNNNNLMSPWGNPLLGLQQTDATQLAQFQLLQNLLQLINDNSSSVNMGNHHSLMNNPLEAYLNGTNTSGLMKGQELYGNPALFLPSPSDSQQDISKPWTDLEGGSNPQAVAFNNNSCIYSTPSHSHETNKVENTLPALVSASPGSGTLNQMESSSNNTDQMFTHSTSSSISDAWEKILEDDTSDSCWKELLDLTSTSASLISW 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1427 347 Gene3D - 14 66 - -
Bisa01g1427 347 FunFam Transcription factor MYB39 69 130 - -
Bisa01g1427 347 CDD SANT 69 112 IPR001005 -
Bisa01g1427 347 CDD SANT 16 61 IPR001005 -
Bisa01g1427 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa01g1427 347 PANTHER F14D16.11-RELATED 1 325 - -
Bisa01g1427 347 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa01g1427 347 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa01g1427 347 Gene3D - 69 138 - -
Bisa01g1427 347 FunFam MYB-related transcription factor 13 66 - -
Bisa01g1427 347 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa01g1427 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa01g1427 347 SMART sant 66 114 IPR001005 -
Bisa01g1427 347 SMART sant 13 63 IPR001005 -
Bisa01g1427 347 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa01g1427 347 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1427 Bisa-ChrBisa01 24000019 24001411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1427 1 340 MYB Transcription Factor Family AT3G02940 45.533 3.64e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1427 Myb_DNA-binding 3.1e-18 CL0123