Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1426 ATGAAGCTGAGCTGCCGTAGCATAATCCTTGCATGTCATGTGTCTTCTTCTTCCTATTTTTGGGAAACTATGGATGCAGAAGATACCAAGAAGGAAGGAAAAAAAAAAAAAAAGCAGCAAAAAGTTCCCTTGTTAAAGCTCTTCTCTTTCGCTGACTTCTATGATTATGTCCTAATGGCCATTGGATCTGTTGGGGCATGTGTTCATGGTGCCTCTGTGCCTGTCTTCTTCATCTTCTTCGGGAAGTTGATAAATGTAATAGGCTTGGCTTATCTTTTTCCAAAAGAAGCTTCCCACAAAGTTGCCAAGTACTCCATGGATTTCGTGTATCTGAGTATAGCAATATTATTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCACACAGGAGAACGACAAGCAGCGAAGATGAGAATGGCTTATCTAAGATCTTTGTTGAATCAGGATATTAGTCTTTTTGATACGGAGGCTTCTACAGGAAAGGTCATTTCTGCCATAACCAGTGACATCATCGTAGTTCAAGATGCTCTGTCTGAGAAGGTGGGAAACTTCATGCACTACATTAGCAGATTTATAGCAGGTTTTATAATTGGGTTTGTGAGAGTGTGGCAGATTAGTTTAGTGACACTTTCGATAGTGCCGTTGATTGCTCTGGCTGGAGGTCTTTATGCGTACGTAACAATCGGGCTTATTGCAAAGGTTCGAAAAGCCTACGTGAGAGCTGGTGAAATCGCTGAAGAAGTTATAGGAAATGTTAGAACAGTGCAGGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATACAAGGCCGCTCTGAAGAACACTTACAAGAACGGTCGAAAAGCAGGACTAGCGAAAGGTCTGGGACTGGGCTCTATGCATTGTGTTCTTTTTCTGTCATGGTCCCTTCTGGTTTGGTTCACTAGCATTATTGTTCACAAGAATATCGCCAATGGTGGAGAGTCTTTCACTACCATGCTCAATGTTGTCATCGCTGGCATATCACTTGGGCAGGCAGCACCAGATATCACTGCATTTGTGCGAGCAAAGGCAGCAGCTTATCCCATATTTGAGATGATAGAGAAGGACACAAAGTCCAAAATCAGCTCAAGAACTGGTTACAAACTAAGCAAATTGGAGGGTCACATCCAGTTTAAAGATGTTTGCTTCAGTTACCCATCTCGTCCTGATGTAGTCATATTCAACAACCTTAACATTGACATTCCTTCGGGAAAAATTGTAGCACTTGTTGGGGGAAGTGGGTCTGGAAAGAGCACTGTTATATCACTGATTGAGCGCTTCTACGAGCCCCTTTCTGGACAGATCCTACTGGATGGCAATAATATCAGGGAACTTGATCTCAAATGGCTGAGGCAGCAAATTGGGTTGGTTAATCAAGAACCTGCCCTTTTTGCTACAAGCATCACGGAGAACATACTGTATGGAAAAGATGATGCCACTTATGAAGAAGTCAAACGAGCTGTGAAGCTTTCAGGTGCTCAGTCTTTCATTAACAATCTTCCCGATCGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGGCAAAAGCAGAGGATAGCAATATCTCGTGCTATAGTGAAGAGCCCATCAATACTTTTATTGGATGAAGCAACGAGTGCTCTGGATGCGGAGTCTGAGAAGAGTGTACAGGAGGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTGATAGTAGCACACAGACTTTCCACAATCAGGAATGCCGATGTAATTGCTGTTGTTCATGAAGGGAAGATTGTAGAAACCGGAAGCCATGAGGAACTCATGGCTAATACAAACAGTACATATGCTTCTCTTGTTCGACTCCAAGAAGCAGCTTCTGTGCAAAGCCACCCCTCAGTGGGCCCTAGCTTGGGACGTCCTTCAAGCATAGGGTACTCGAGAGAACTGTCCCGTACGACAAGCAGCCATGGGGGTAGTTTTCGATCAGAAAAAGAATCTATTGGGGAAGTGGAAAGTGTTGGGAAGTTAAGGAGTGTTTCTGCTAGAAGATTATACTCCATGATTGGACCTGATTGGCATTATGGGGTTTTTGGGACATTATGTGCATTTGTTGCTGGAGCCCAGATGCCACTCTTTGCTCTTGGAATCTCTCACGCTCTTGTATCGTACTACATGGACTGGGAGACTACTTGTCGCGAAATAAAAAAAATTGCATTCCTCTTCTGTGGGGCAGCAGTTATAACTGTCATTGTCCATGCCATTGAACACCTCTCCTTTGGAATCATGGGCGAGCGACTTACTCTGCGTGTCCGAGAATTGATGTTCTCCGCTATTTTGAGGAACGAAATTGGGTGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCGTCGCGGTTAGAGACTGACGCCACTCTGTTACGAACTATAGTTGTTGATCGGTCGACAATTCTGTTGCAGAACGTGGGTCTGGTTGTTGCTTCATTCATCATAGCCTTCCTCTTGAACTGGAGGATAACGCTTGTTGTCATAGCCACGTATCCTTTGATCATTTGTGGTCACATTAGCGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAGGGCCAACATGCTGGCTGGGGAGGCTGTGAGTAACATACGCACCGTCGCTGCATTTTGCTCCGAAGAAAAGGTCCTCGAGCTTTATGCCAATGAGATTGTTGATCCTTCCAAGCGTTCATTCAAACGAGGCCAGATTGCAGGCATATTCTATGGCATTTCCCAGTTCTTTATCTTCTCATCTTATGGCCTTGCCTTGTGGTATGGTTCTGTGTTGATGGGAAAGGAGCTTGCGAGCTTTAAGTCAATCATGAAGTCGTTCATGGTGTTGATTGTGACAGCACTGGCGATGGGAGAGACATTGGCTCTGGCTCCAGACCTGTTGAAAGGGAATCAAATGGTAGCGTCAGTGTTCGAGGTGATGGACAGAAAGTCAGGAGTGATAGGGGATACAGGAGAAGAGCTGAAGACGGTAAAGGGTACTATTGAGTTTAAGGGTGTGAATTTCAGCTACCCTTCGAGACCAGATGTGGTCATCTTCAAGGATTTTAGTCTGAGAGTGCCTTCTTGCAAGAGCCTTGCATTGGTGGGGCAGAGTGGTTCTGGTAAAAGCTCTGTTATCTCCCTCATTCTCAGGTTTTACGATCCAACATCTGGGGAGGTGATGATTGATGGAAAAGACATAAAGAGAGTGAATCTGAAATCGCTGAGGAAACACATAGGGCTGGTGCAACAAGAACCAGCCCTGTTCGCAACATCAATATACCAAAACATTGTATACGGCAAGGAAGGAGCCTCAGAATCAGAAGTGATCGAAGCAGCGAAGCTGGCGAATGCTCATAGCTTCATCAGTGGGCTTCCCGAGGGCTACTCCACCAGAGTGGGTGAGCGAGGAGTCCAACTCTCGGGAGGCCAAAGACAGAGGGTTGCCATAGCCAGAGCCGTCCTCAAGAACCCAGAAATCTTGCTCCTCGACGAAGCCACCAGCGCCTTGGACGCGGAGTCGGAGCGCGTGGTTCAGCAAGCCCTCGACAGGTTGATGCAGAACAGAACCACTCTCATGGTGGCGCATAGGCTTTCCGCCGTAAGAAACGCCGATCAGATCTCTGTTTTGCAGGAGGGGAAGATAGTGGAGGAGGGGTCTCATTCCAGTCTCTTAGAGAACAAGAATGGAGCCTACTTCAAATTAGTCAACCTTCAACTGCAACACAGTGTTCCACAATAG 3780 0.4561 MKLSCRSIILACHVSSSSYFWETMDAEDTKKEGKKKKKQQKVPLLKLFSFADFYDYVLMAIGSVGACVHGASVPVFFIFFGKLINVIGLAYLFPKEASHKVAKYSMDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSLLNQDISLFDTEASTGKVISAITSDIIVVQDALSEKVGNFMHYISRFIAGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALKNTYKNGRKAGLAKGLGLGSMHCVLFLSWSLLVWFTSIIVHKNIANGGESFTTMLNVVIAGISLGQAAPDITAFVRAKAAAYPIFEMIEKDTKSKISSRTGYKLSKLEGHIQFKDVCFSYPSRPDVVIFNNLNIDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSITENILYGKDDATYEEVKRAVKLSGAQSFINNLPDRLETQVGERGIQLSGGQKQRIAISRAIVKSPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVHEGKIVETGSHEELMANTNSTYASLVRLQEAASVQSHPSVGPSLGRPSSIGYSRELSRTTSSHGGSFRSEKESIGEVESVGKLRSVSARRLYSMIGPDWHYGVFGTLCAFVAGAQMPLFALGISHALVSYYMDWETTCREIKKIAFLFCGAAVITVIVHAIEHLSFGIMGERLTLRVRELMFSAILRNEIGWFDDTNNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFLLNWRITLVVIATYPLIICGHISEKLFMKGYGGNLSKAYLRANMLAGEAVSNIRTVAAFCSEEKVLELYANEIVDPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSGVIGDTGEELKTVKGTIEFKGVNFSYPSRPDVVIFKDFSLRVPSCKSLALVGQSGSGKSSVISLILRFYDPTSGEVMIDGKDIKRVNLKSLRKHIGLVQQEPALFATSIYQNIVYGKEGASESEVIEAAKLANAHSFISGLPEGYSTRVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDAESERVVQQALDRLMQNRTTLMVAHRLSAVRNADQISVLQEGKIVEEGSHSSLLENKNGAYFKLVNLQLQHSVPQ 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1426 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 356 - -
Bisa01g1426 1259 Gene3D - 1004 1253 IPR027417 -
Bisa01g1426 1259 FunFam ABC transporter B family member 4 1004 1256 - -
Bisa01g1426 1259 FunFam ABC transporter B family member 1 46 382 - -
Bisa01g1426 1259 FunFam ABC transporter B family member 2 815 1011 - -
Bisa01g1426 1259 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524|GO:0016887
Bisa01g1426 1259 Gene3D ABC transporter type 1, transmembrane domain 107 856 IPR036640 GO:0005524|GO:0016020
Bisa01g1426 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 383 619 IPR003439 GO:0005524
Bisa01g1426 1259 SUPERFAMILY ABC transporter transmembrane region 47 353 IPR036640 GO:0005524|GO:0016020
Bisa01g1426 1259 PANTHER ABC TRANSPORTER B FAMILY 25 624 IPR039421 -
Bisa01g1426 1259 Gene3D ABC transporter type 1, transmembrane domain 924 1255 IPR036640 GO:0005524|GO:0016020
Bisa01g1426 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 348 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa01g1426 1259 SMART AAA_5 1041 1227 IPR003593 GO:0016887
Bisa01g1426 1259 SMART AAA_5 410 602 IPR003593 GO:0016887
Bisa01g1426 1259 MobiDBLite consensus disorder prediction 626 662 - -
Bisa01g1426 1259 CDD ABC_MTABC3_MDL1_MDL2 383 621 - -
Bisa01g1426 1259 Gene3D - 381 647 IPR027417 -
Bisa01g1426 1259 ProSitePatterns ABC transporters family signature. 522 536 IPR017871 GO:0005524|GO:0016887
Bisa01g1426 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 684 997 - -
Bisa01g1426 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 621 IPR027417 -
Bisa01g1426 1259 SUPERFAMILY ABC transporter transmembrane region 681 995 IPR036640 GO:0005524|GO:0016020
Bisa01g1426 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1250 IPR003439 GO:0005524
Bisa01g1426 1259 FunFam ABC transporter B family member 4 373 628 - -
Bisa01g1426 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1253 IPR027417 -
Bisa01g1426 1259 CDD ABC_MTABC3_MDL1_MDL2 1014 1252 - -
Bisa01g1426 1259 MobiDBLite consensus disorder prediction 642 660 - -
Bisa01g1426 1259 Pfam ABC transporter 402 550 IPR003439 GO:0005524
Bisa01g1426 1259 Pfam ABC transporter 1033 1181 IPR003439 GO:0005524
Bisa01g1426 1259 Pfam ABC transporter transmembrane region 61 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa01g1426 1259 Pfam ABC transporter transmembrane region 696 967 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa01g1426 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 695 981 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1426 Bisa-ChrBisa01 23985566 23995564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1426 32 1252 Calmodulin-binding Proteins AT2G36910 49.442 0.0 1214