Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1423 ATGGACGGAGTCAATAGCAGCGGCACGCAGACGCCGGCCCCGGCGCCGGCGCCCATTCCTAATGCCAACGCGCCGCCGCCGTTTCTTAGTAAGACATATGACATGGTCGATGACCCGTCCAGTGATGCGATCGTTTCTTGGAGCTCAACCAACAATAGCTTTGTGGTCTGGAACCCTCCTGAGTTTGCCAGGGACCTTTTGCCCAAGTACTTCAAGCACAATAACTTTTCCAGCTTTGTTAGGCAGTTGAACACATATGGTTTCAGGAAGGTTGATCCAGATCGTTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGATTAAGAGTATAACCCGGCGAAAACCTGCCCATGGTCATAGCCATCAACAGGCACAACAATCACATGGACAGAGTTCATCTGTAGGGGCATGTGTAGAGGTTGGGAAGTTTGGTCTTGAGGAAGAGGTTGAGAGGCTTAAACGAGATAAGAACGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAGCAGGCCACTGATAACCAGATGCAACAAATGGTTCAGCGCTTTCAGGGAATGGAACAACGTCAGCAACAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGCCCTGGTTTCTTGGCTCAATTTGTACAACAGAAAAATGAGAGCAATAGGCGCATAACTGACGCCAACAAAAAACGGCGGCTTAAGCAGGAAGGTGTTGCCGAAACGGAGCATGCTGCTGCTCCTGATGGACAAATTGTTAAATATAAACCTCTGATGAATGAGGCAGCAAAAGCAATGCTAAGGCAGATCATGAAATTGGATACTTCTCGGCTGGAATCTTTTAACAATAACTCTGATAATTACTTGATTGGGGATGGTTCAACATCACCCAGTGCAATGGACAGTGGCAGCTCTTCCAACCGGAGTAGTGGAGTAACCCTTCAAGAGTTTCCACCAACTACAGTGAATGCCCACTCATCCGGGAAATCTGAAGTAAAGTCTTCTTCACAGTCTGCAGCTCCTGAAAAAGTTACAACTGCTCAATTTCCAGATGTAAATGTGCTGGGAGGTGCATCTGAGGCACCTTCCATCTCTGTTTCTGAGGTAGATGTCATCATGCCTGAGCTTTCGTTAATACCAGAGATAGGGACAGGAAATATTCTTGATATTTCTGAAGAGAATTTTATGGGACCGGAGACGGGAAATGAGGGATATATGGATCCTACCTCATTGGATGTAAATGTGGCATTGCCAATTGATTTTGGTAGTATTTCACCAGATACAGACATTGATGCCTTGTTGCGCAGTTCTTTTTGGGATGAGTTTGTGCAAAGTCCACTGCCAGAGGACATTGAGACCGATGCTGCTGAAGTTTCCAAGGGGAATGATGTGCAGCCAATGGAAAATGGATGGGACAAAGCTGAACTTATGGACCAACCTACAAAGCAGACGGGTCTTCTTTCTTCTGATGCAAAAAGAGTTTGA 1488 0.4657 MDGVNSSGTQTPAPAPAPIPNANAPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLIKSITRRKPAHGHSHQQAQQSHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRFQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQKNESNRRITDANKKRRLKQEGVAETEHAAAPDGQIVKYKPLMNEAAKAMLRQIMKLDTSRLESFNNNSDNYLIGDGSTSPSAMDSGSSSNRSSGVTLQEFPPTTVNAHSSGKSEVKSSSQSAAPEKVTTAQFPDVNVLGGASEAPSISVSEVDVIMPELSLIPEIGTGNILDISEENFMGPETGNEGYMDPTSLDVNVALPIDFGSISPDTDIDALLRSSFWDEFVQSPLPEDIETDAAEVSKGNDVQPMENGWDKAELMDQPTKQTGLLSSDAKRV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1423 495 MobiDBLite consensus disorder prediction 115 137 - -
Bisa01g1423 495 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 MobiDBLite consensus disorder prediction 1 27 - -
Bisa01g1423 495 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 SUPERFAMILY "Winged helix" DNA-binding domain 23 117 IPR036390 -
Bisa01g1423 495 Coils Coil 146 187 - -
Bisa01g1423 495 FunFam Heat shock transcription factor 1 21 118 - -
Bisa01g1423 495 MobiDBLite consensus disorder prediction 475 495 - -
Bisa01g1423 495 MobiDBLite consensus disorder prediction 224 243 - -
Bisa01g1423 495 Coils Coil 212 232 - -
Bisa01g1423 495 Gene3D - 21 118 IPR036388 -
Bisa01g1423 495 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1423 495 MobiDBLite consensus disorder prediction 293 345 - -
Bisa01g1423 495 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 317 IPR027725 -
Bisa01g1423 495 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1423 Bisa-ChrBisa01 23903397 23907295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1423 11 489 HSF AT1G32330 54.620 5.10e-173 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa01g1423 HSF_DNA-bind 1.4e-32 CL0123