Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1417 ATGAGCTTTCAGGACATTGAAGCTGGCCGGTCTTTCGCTGCCAGGCGAAACCTCAATGCCAACCAAGACCCTACGCAAGCGGTGGCGTCGGGCATCTTTCAGATCAACACCGCCGTTTCCACGTTTCAGAGGCTCGTCAATACCCTTGGAACCCCGAAAGACACGCCTGAGCTACGCGATAAATTGCACAAGACAAGACTGCATATTGGGCAATTGGTGAGGGATACATCAGCTAAACTCAAGCAGGCTAGTGAAATAGATCACCATGCTCAAGTTAGCGCAAGTAAGAAGATAGCAGATGCTAAACTTGCAAAAGATTTTCAGGCAGTTTTGAGGGAATTTCAGAAGGCACAGCAGCTTGCAGCCACGAGGGAAACAGCCTACACTCCTTTTGTTCCACAAGCAGTTCTTCCTTCCAGTTATACTGCCAGTGAAGTAGATGTTAGTTCTGATAAGACTCCAGAACAGCGTGCCCTTCTTGTGGAATCCAAAAGGCAGGAGGTTTTATTGTTGGATAATGAAATTGCCTTCAATGAGGCTATTATTGAGGAACGTGATCATGGCATTCAAGAAATCCAACAGCAAATTGGTGAAGTAAATGAGATTTTTAAAGATCTTGCTGTGCTTGTGCATGAGCAAGGAACCATGATTGATGATATTGGATCCAATATTGGGAGCTCCCATGCAGCAACTGCAGGAGCAAAATCTCAACTTGCGAAAGCTGCGAAGACCCAAAAATCTAATTCGTCTCTGACATGCTTGCTTTTGGTGATATTTGGAATTGTGCTCCTCATCGTGGTCATTGTTCTTGCTGCTTAG 819 0.4542 MSFQDIEAGRSFAARRNLNANQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELRDKLHKTRLHIGQLVRDTSAKLKQASEIDHHAQVSASKKIADAKLAKDFQAVLREFQKAQQLAATRETAYTPFVPQAVLPSSYTASEVDVSSDKTPEQRALLVESKRQEVLLLDNEIAFNEAIIEERDHGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIGSSHAATAGAKSQLAKAAKTQKSNSSLTCLLLVIFGIVLLIVVIVLAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1417 272 SMART tSNARE_6 174 241 IPR000727 -
Bisa01g1417 272 SMART SynN_4 13 126 IPR006011 GO:0016020
Bisa01g1417 272 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 241 IPR000727 -
Bisa01g1417 272 SUPERFAMILY t-snare proteins 18 234 IPR010989 GO:0016020|GO:0016192
Bisa01g1417 272 PANTHER SYNTAXIN 25 263 IPR045242 -
Bisa01g1417 272 Pfam SNARE domain 215 267 IPR000727 -
Bisa01g1417 272 ProSitePatterns Syntaxin / epimorphin family signature. 185 224 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa01g1417 272 Gene3D - 173 272 - -
Bisa01g1417 272 FunFam Syntaxin-22 like 19 132 - -
Bisa01g1417 272 Pfam Syntaxin-like protein 29 128 IPR006011 GO:0016020
Bisa01g1417 272 FunFam Syntaxin-22 like 172 272 - -
Bisa01g1417 272 CDD SNARE_Qa 182 240 - -
Bisa01g1417 272 CDD SynN 22 147 IPR006011 GO:0016020
Bisa01g1417 272 Gene3D - 13 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1417 Bisa-ChrBisa01 23883016 23885976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1417 1 260 SNARE and Associated Proteins AT5G46860 78.077 4.58e-147 410