Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1397 ATGAGTGGTAGAAAAAAGAAGCAGAAGCTAGAGGACACAACCAGTAGTTCTGCGTCGCTGTCGTCTCCGTCGAGCTCCTCCGATTCGGACCACTCTTCCAAGAGGCGGCACCGCCACAGAAAGGAGCGGCGGAGAACGAGCGATGGGAGGTCCAAGAGAGATAGAGAACGGAGAAGGGAAAAGGACGAGAAAAGAAGGAAGAAGAGAGAACGGAAGGAGGGCAGTAGACACAGTTCGAGGAAAGAAAGAAAATTGAGAAGAGAGGGGAAGAAGAAGAAGAAGAGGGTCTACGATTCCGATGAAAGTGAAGATGGGTTTGAGTCTTCGAGTGGTGGGTCAGAGGAAGAAGAGAAATTGAGGGTTGAACCTGAAACGATGTTGCGTGAAATGATGAGGGAGTTTCCCAATGCTGGCAACGATTTGAAACTGCTTTTGCAAATGATCGATGATGGGCAAGCTGTTGACATAAAAGGTATATCTGAAAGATTGCTCAGGAAGCATTTGAAGAAGCTGTTTCTTTCATTAAATCTTGAGGACAAGGGAGATAGAGTTTTCTTGCTTCCTTCTGAAGTTCGCCCCACTTTGGAGGTTGTTGGCTCTCTAATTCACTCTTATATGGATCCCAAAAGTGAGCGAACTGATCCTTCTGTAGCAATGACCGAAACACATTCAGTTCCACAAGATATGGTAAGTGAGCAGATGGTAGATGAGCGTAATTTGAGAACTGTAGAAGATCATTCTGTTGGTCCTCAAAGAAGGATGATAGGCCCTGCAATGCCATCTGCTGAATTACTTGCTGCTGCTGCCAAATTAACAGAGGCACAATCTGAGCTCAGAGAAGCCGAATTGGACGACGATGCTGAATTTTTTATAGGACCTCCACCACCTGCTATGGTTACTGAAGCAGAATCATCTAATGAGGCAGAACGCTTTGAAGAGGTCACTAGAATCATGGAAGCTGAGGCTGACAGCCCATATGATGTTCTTGGAATCAACCATAATATGTCCAGTGATAACGTAAAGAAAAGGTACTGGAAGATATCACTTTTGGTTCACCCTGATAAATGCTCTCATCCTCAAGCCCACCAAGCATTTATTAAATTAAATAAAGCTTTTAAAGAGTTGCAAGATCCAGAAAAGAGGAAAGCAATGGATGATAAAATCAAACTTAAGCAAGAACAAGAGGAAATGAAGGCTGAGCTCAAAGCTATGCGTGAGGCTGCACTCTGGAGAAGATCGCAAGGTATATCAATGGAAGGTGATGATGTGCTTCTGGCAGAGGCAGATGTCAAAGTAGAACCAAAAAGAGATGAATGGATGACAACACTGCCTCCAGAGAGGAAACCAGGAATGACGATGCAATCAACTAAGTTTAGTCGAAGCTCTAAGGAAGGACGTGGCGATACTAGCGCCTGGACAGACACTCCTTCAGACAGAGCCCAGAAAGCAAAGATGAATTATCTAGAAGCATACAATGAGGCTGCATCGCTTGCCTCAAAAGACGAGGATAAGAAAAAGGGTAGTGAGGATGCAGAGTTGGTGGACAAATACAATAAAGCAAAGAGGTCAAAATCATTGGTGCAGAAGTACCAAGAAGAGGTTGCTACCAAATCTAGGAAGAAATCAAAACAGAAACAAGAAGCAGAGAAGGAAGATTGGGTGGGTCAACATCCATGGAAGCCTTGGGACCGCGAAAAGGATCTAACGGCTGGGAGGCAGAATATAACATTGGATCCGGAAAACATGGGTCAGGGCTTATCTTCAAGATTTTCTTCTGGAAACTTCCAGAGGAACTTCCTTTAG 1803 0.4443 MSGRKKKQKLEDTTSSSASLSSPSSSSDSDHSSKRRHRHRKERRRTSDGRSKRDRERRREKDEKRRKKRERKEGSRHSSRKERKLRREGKKKKKRVYDSDESEDGFESSSGGSEEEEKLRVEPETMLREMMREFPNAGNDLKLLLQMIDDGQAVDIKGISERLLRKHLKKLFLSLNLEDKGDRVFLLPSEVRPTLEVVGSLIHSYMDPKSERTDPSVAMTETHSVPQDMVSEQMVDERNLRTVEDHSVGPQRRMIGPAMPSAELLAAAAKLTEAQSELREAELDDDAEFFIGPPPPAMVTEAESSNEAERFEEVTRIMEAEADSPYDVLGINHNMSSDNVKKRYWKISLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDDKIKLKQEQEEMKAELKAMREAALWRRSQGISMEGDDVLLAEADVKVEPKRDEWMTTLPPERKPGMTMQSTKFSRSSKEGRGDTSAWTDTPSDRAQKAKMNYLEAYNEAASLASKDEDKKKGSEDAELVDKYNKAKRSKSLVQKYQEEVATKSRKKSKQKQEAEKEDWVGQHPWKPWDREKDLTAGRQNITLDPENMGQGLSSRFSSGNFQRNFL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1397 600 CDD DnaJ 325 377 IPR001623 -
Bisa01g1397 600 PRINTS DnaJ domain signature 344 359 IPR001623 -
Bisa01g1397 600 PRINTS DnaJ domain signature 326 344 IPR001623 -
Bisa01g1397 600 PRINTS DnaJ domain signature 360 380 IPR001623 -
Bisa01g1397 600 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 600 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 436 480 - -
Bisa01g1397 600 Coils Coil 53 73 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 70 92 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 498 600 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 47 69 - -
Bisa01g1397 600 Coils Coil 380 407 - -
Bisa01g1397 600 Coils Coil 264 284 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 574 600 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 498 571 - -
Bisa01g1397 600 SUPERFAMILY Chaperone J-domain 290 382 IPR036869 -
Bisa01g1397 600 Pfam DnaJ domain 325 385 IPR001623 -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 13 28 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 448 480 - -
Bisa01g1397 600 Gene3D DnaJ domain 309 408 IPR036869 -
Bisa01g1397 600 ProSiteProfiles dnaJ domain profile. 324 389 IPR001623 -
Bisa01g1397 600 SMART dnaj_3 323 380 IPR001623 -
Bisa01g1397 600 Coils Coil 527 547 - -
Bisa01g1397 600 MobiDBLite consensus disorder prediction 1 121 - -
Bisa01g1397 600 Pfam Protein of unknown function (DUF3752) 444 591 IPR022226 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1397 223 390 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.570 9.16e-06 46.2