Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1395 ATGAGCAACAACACAGAGAATCATGAATATGATGTTAGCCAGCTTGAAGCTATGATGCTATCAAGTGCTTTTGTTTACCCAGCAGTGTTAAAAGCTGCCATTGAGCTAAACCTATTTGAGATCATTTCTAAGGGAAGCCCTAAGGGTATGTCACCCTCTGACATTGCTTCTAAGCTTCCAAATTCACGCCCAGCCACCGTTGGCCGCCTCGACCGGCTGCTTTTCTTGCTCTCCACTTACTCTCTGCTAACTTGTTCTTCTGAGGAAAGTTGTGATGAAGATGATGGTGTTGCTGAGAGGCTTTATGGGTTATCTCCCATTGCTAAATACTTCGTTCCTGATGAGGATGGAGCCTCTTATGCTGCAATCTCAATATTGAATTATCACCCAACTCTTACAAAAGTTTGGCAAAAATTCAAGGAAGTGATTGTTGGGGTTGGGGGTGATGAAGAGGACCTGTTCAAGAAAGAAAATGGGATGAGTATGTATGAATACATGGAAACAGACCCAACACTGAAATCCTTGTTCCATAGAGCAATGTCTGATCTCTCAATCATGCACATGAAGCTGATTCTTGAGACATACAAAGGATTTGATTTTGAGGGCATATCAACACTTGTTGATGTGGCTGGTGGCAATGGACAAACCCTTAACATGATCATTTCTAAGTACCCTTCAATAAAGGGTATTAACTTTGATTTGCCCCATGTAGCCCTTCATGCCCCACCCCATCCAGGAATCACGCATGTTGGGGGAGATATGTTCAAAGATGTCCCAGAAGGCGATGCTATAATGCTTAAGAGTATTATCCACAACTGGGCAGACGAAAAGTGCATTCAAATTTTAAAGAACTGCCATGCATCCCTCAAGAAAGATGGCAAGGTCGTCGTAATCGACATGATAATGCCTGAAGTACCGACCACAACCGACGGCCATAAGATTGCTTCGATTCTTGACAACGTCATGAACGTCCAAGCTGGTGGGAGAGAGAGATCTGAGAGAGAATTCCAAGCTCTGTGCAAAGCTGCTGGCTTTTCTGGGTACCACGTTGCCTCTCGTCTTCTCTCTTCAGCTTTGGGAGTCATTGAGTTCTATAAATAA 1101 0.4369 MSNNTENHEYDVSQLEAMMLSSAFVYPAVLKAAIELNLFEIISKGSPKGMSPSDIASKLPNSRPATVGRLDRLLFLLSTYSLLTCSSEESCDEDDGVAERLYGLSPIAKYFVPDEDGASYAAISILNYHPTLTKVWQKFKEVIVGVGGDEEDLFKKENGMSMYEYMETDPTLKSLFHRAMSDLSIMHMKLILETYKGFDFEGISTLVDVAGGNGQTLNMIISKYPSIKGINFDLPHVALHAPPHPGITHVGGDMFKDVPEGDAIMLKSIIHNWADEKCIQILKNCHASLKKDGKVVVIDMIMPEVPTTTDGHKIASILDNVMNVQAGGRERSEREFQALCKAAGFSGYHVASRLLSSALGVIEFYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1395 366 Pfam Dimerisation domain 29 77 IPR012967 GO:0046983
Bisa01g1395 366 Pfam O-methyltransferase domain 140 346 IPR001077 GO:0008171
Bisa01g1395 366 PANTHER O-METHYLTRANSFERASE 18 351 IPR016461 GO:0008168
Bisa01g1395 366 CDD AdoMet_MTases 205 302 - -
Bisa01g1395 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Bisa01g1395 366 Gene3D Vaccinia Virus protein VP39 112 366 IPR029063 -
Bisa01g1395 366 Gene3D - 1 111 IPR036388 -
Bisa01g1395 366 SUPERFAMILY "Winged helix" DNA-binding domain 13 116 IPR036390 -
Bisa01g1395 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 352 IPR029063 -
Bisa01g1395 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 366 IPR016461 GO:0008168
Bisa01g1395 366 FunFam Caffeic acid 3-O-methyltransferase 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1395 Bisa-ChrBisa01 23383133 23385358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1395 11 366 Monolignol Biosynthesis Gene Families AT5G54160 50.000 1.09e-111 328