Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1390 ATGAGCAACAACACAGAGAATCATGAACATGATGTTAACCTTGAAGCTATGATGCTAACAAGTGCTTTTGTTTACCCTGCAGTGTTAAATGCTGCCGTTGAGCTAAACCTGTTTGAGATCATTTCAAAGGGGAGCCCCAAGGGCATGTCACCCTCTGACATTGCTTCCAAGCTTCCAAATTCAAGCCCAAACGCTGTCGGCCGCCTCGACCGGCTGCTTTTCTTGCTCTCCACTTACTCGCTGCTAACTTGTTCTTCTGAGACAAATTATGACGAAGATGGTGTCCTTGTTGAGAGGCTTTATGGGTTATCTCCCATTGCTAAATACTTGGTTCCTGATAAGGATGGAGCCTCTTATGCCGCAATCTCAAGATTGAATTATCACCCAACTCTTACAAAAGTTTGGCAAAACTTCAAGGAAGTGATTGTTGGGGGTGATGAAGAGGACCTGTTCAAAAAAGTAAATGGGATGAGTATGTATGAATACATGGAAACAGACCCAACACTGAAATCCTTGTTCCATAGAGCAATGTCTGATCTCTCAACCATGCACATGAAGCTGATTCTTGAGACATACAAAGGATTTGAGGGCATATCAACACTTGTTGATGTGGCTGGTGGCACTGGACAAACTCTCAACATGATCATTTCTAAGTGCCCTTCAATAAAGGGTATTAACTTTGATTTGCCCCATGTAGCCCATCATGCCCCATCCCATCCAGCAATCACGCATGTTGGGGGAGATATGTTCAAAGGTGTCCCAGAAGGCGATGCTATAATGCTTAAGAGTATCATCCACAACTGGACAGACGAAAAGTGCATTCAAATTTTAAAGAATTGCCATGCATCCCTCAAGAAAGATGGCAAGGTCGTCGTGATCGACATGATAATGCCTGAAGCACCGACCACAACCGACGGCCATAAGATTGCTTCGATTCTTGACAACGTCATGAATGTCCAAGCTGGTGGGAGGGAGAGATCTGAGAGAGAATTCCAAGTTCTGTGCAAAGCTGCTGGCTTTTCTGGGTACCACGTTGCCTCTCGTCTTCTCTCTTCAGCTTTGGGAGTCATTGAGTTCTATAAATAA 1086 0.4438 MSNNTENHEHDVNLEAMMLTSAFVYPAVLNAAVELNLFEIISKGSPKGMSPSDIASKLPNSSPNAVGRLDRLLFLLSTYSLLTCSSETNYDEDGVLVERLYGLSPIAKYLVPDKDGASYAAISRLNYHPTLTKVWQNFKEVIVGGDEEDLFKKVNGMSMYEYMETDPTLKSLFHRAMSDLSTMHMKLILETYKGFEGISTLVDVAGGTGQTLNMIISKCPSIKGINFDLPHVAHHAPSHPAITHVGGDMFKGVPEGDAIMLKSIIHNWTDEKCIQILKNCHASLKKDGKVVVIDMIMPEAPTTTDGHKIASILDNVMNVQAGGRERSEREFQVLCKAAGFSGYHVASRLLSSALGVIEFYK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1390 361 CDD AdoMet_MTases 200 297 - -
Bisa01g1390 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 115 IPR036390 -
Bisa01g1390 361 Pfam Dimerisation domain 28 76 IPR012967 GO:0046983
Bisa01g1390 361 Gene3D - 1 110 IPR036388 -
Bisa01g1390 361 Gene3D Vaccinia Virus protein VP39 111 361 IPR029063 -
Bisa01g1390 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Bisa01g1390 361 FunFam Caffeic acid 3-O-methyltransferase 1 110 - -
Bisa01g1390 361 Pfam O-methyltransferase domain 135 341 IPR001077 GO:0008171
Bisa01g1390 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 347 IPR029063 -
Bisa01g1390 361 PANTHER O-METHYLTRANSFERASE 16 346 IPR016461 GO:0008168
Bisa01g1390 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1390 Bisa-ChrBisa01 23277993 23280994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1390 9 361 Monolignol Biosynthesis Gene Families AT5G54160 49.860 2.11e-113 332