Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1386 ATGATGAGTGCGAGGGAGAAGAAGGATCAGGTGAGGATTCCGACAAAGGAGGAAGACGATGAAGCTTGCCTGTACGCGATGCTGTTGTCTAGCATCGAGGTGTTGCCTGCGATTCTGAACGCGGCGATTGAGCTGAAGGTGTTCGACATAATGTCAGAGAGAGGAGAGGGCGGCGGGTACTTGTCGGTGAGTGAGATCGCGTCGGAGCTTACGGCGGAGCACGGGGAGTTGGAGAACAGGCTGGATCGGATGCTGCGAGTGCTGGCGGCGTTCAAGGTGGTGGAGTGCAAGGGTGGGAGGAGGGAAGAAGAGGGAGAGGTGGAGAGAGTGTACAGACTGTCGCTGGCGGGGAGTTACTTCTTGCAGAATCGAAGTGAGAGCCTCGCTTCCTTCTCCAACCTCACCTCCCATCCAGCCACTGTCAAGGTTTGGCTCAACATGAAGGAAGCAATCCTGGATGGAGGAATAGACCTGTTCAAGAAAGTGCATGGGATAACGATGTGGAAGCAGATGGAGAAGGAGCCGAAGCTGAACCAGACATTCAACAAGGCCATGGCAGGGATATCAGCAATACAGATGAGGAAGTATCTGGAAGTGTATGAAGGATTTGAAGGAGTGTCAACCCTAGTTGATGTTGGAGGAGGCACTGGCCAGAGTCTCAAAATGATCATCTCCAAGTACCCTCATATTAAGGGCATTAACTTTGATTTGCCCCAAGTCATTCAACATGCTCCACCCATTCCAGGAATTGAGCATGTTGGAGGAGACATGTATGCAAGTGTTCCAAAGGGTGATGCCATAATGATAAAGGCTACATGCCATAACTGGTCAGATGAAAAATGTGTAGCACTTTTGAAGAACTGTTACAAAGCTCTTCCACAGAAAGGGAAGGTGATCATTTTCGACATGATAATGCCTGAAGAACCAGACACAAGTGATGCTTCCAAGTATGTCTCCATTATAGACAACACAATGTTCATACAAGCTGGAGGTAAAGAAAGAACAGAGAAAGAGTTTCAGAAACTTTGCATAGACTCTGGATTCTCCAGTTTCAGAGTTGTTTCTCGAGCTCTTTCCATTTATGGTGTCACAGAGTTTTACAAATGA 1107 0.4815 MMSAREKKDQVRIPTKEEDDEACLYAMLLSSIEVLPAILNAAIELKVFDIMSERGEGGGYLSVSEIASELTAEHGELENRLDRMLRVLAAFKVVECKGGRREEEGEVERVYRLSLAGSYFLQNRSESLASFSNLTSHPATVKVWLNMKEAILDGGIDLFKKVHGITMWKQMEKEPKLNQTFNKAMAGISAIQMRKYLEVYEGFEGVSTLVDVGGGTGQSLKMIISKYPHIKGINFDLPQVIQHAPPIPGIEHVGGDMYASVPKGDAIMIKATCHNWSDEKCVALLKNCYKALPQKGKVIIFDMIMPEEPDTSDASKYVSIIDNTMFIQAGGKERTEKEFQKLCIDSGFSSFRVVSRALSIYGVTEFYK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1386 368 Gene3D - 2 120 IPR036388 -
Bisa01g1386 368 SUPERFAMILY "Winged helix" DNA-binding domain 17 124 IPR036390 -
Bisa01g1386 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 368 IPR016461 GO:0008168
Bisa01g1386 368 FunFam Caffeic acid O-methyltransferase 122 368 - -
Bisa01g1386 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 356 IPR029063 -
Bisa01g1386 368 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Bisa01g1386 368 PIRSF O-mtase 3 368 IPR016461 GO:0008168
Bisa01g1386 368 Coils Coil 67 87 - -
Bisa01g1386 368 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Bisa01g1386 368 PANTHER O-METHYLTRANSFERASE 26 366 IPR016461 GO:0008168
Bisa01g1386 368 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Bisa01g1386 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1386 Bisa-ChrBisa01 23126902 23132164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1386 14 360 Monolignol Biosynthesis Gene Families AT5G54160 47.564 1.42e-111 328