Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1377 ATGGGCAGGTATGGGTACAATACCTTTTTGCTCTTTGTTTCTCTGTGCTTTTTGTTCTGTCCAATGGTGCAGTCTCTGCTATCGCAGAACCAAACCAACACCATGACCACTCTCTCCCAGCTTCTCCGTGGAACTGATGTTCCTTGGAATGTTATAAGCCACCCAAACCCGTGTCTATGGAAGGGAGTCATTTGCGACCCCACCAATACCTCTATAACTGAAATTGTACTGTCTGGGCATTCCCTCACTTCGTCCGAATTTCTGCATGTTCTTTGCCAAATTGAAACTCTGCAGCATCTTGATCTCAGTCGTAACCACCTGGACTCAATCCCAGATGCATTTATCACCGAGTGTGGAAAGATTGAGGGGTTAAAGATGCTCAATTTTAGTGGGAACGTGATAAGAGGTTCTTTTCCTACTTTTCATGGTTTCGTTGGGTTAGAATCCCTGGATATGTCTTACAATTCCTTTCAGGGGAAGATTGATTCTCAGTTAGCTGGATTGGTGAACCTCAAGAGGTTAAACCTTAGTTTCAATGGCTTTAATGGGCCTCTTCCTACCAAGCTGGGAAATTCCTTGGCTTTGGAGCAGCTTGTGCTATCGGTAAATCACTTTGATGGAACGATCCCTGATGAAATCTTGCGTTACAAAAATTTGTTTTTGCTTGATCTTGGAACAAATAACCTTACAGGGTCTATTTCGAGCAACATCGGAAGTCTATCCAAATTGGATACTTTGATTCTTTCATCTAATAACCTCACTGGGGAAATCCCAACAACACTTCTGAACATCACTACCCTCACCCGTTTTGCAGCCAATTCAAACAAATTTAATGGTTCTGTTCCCAGTGGAATTACAGAATCTCTCCAGAGTTTGGATCTTAGTTATAATGAGTTGTCCGGGCCTATTCCCGAAGACCTTTTATCACAACGACATTTGCAGCTCGTTGATTTGTCCAATAATTTGTTAGCTGGGCGATTACCTGCTAGTATATCTTCTAGCATAATCAGGCTGAGATTAGGTTACAATAACCTGTCTGGGGAGATAGCTCCGACAATTTTTACTGCATATCAGAAATTGATGTATATGGAGCTCGAACGGAATAACTTAAACGGCTCAATACCACCTGAGGTGGGTTCTTGCCAGAATTTGTCATTGTTGAACTTGGCTAACAATCAACTAATTGGGGAACTGCCAACAAAGCTGGGTAGCCTTAGCAAACTTCAAGTCTTGCAGCTTCAAATGAATAAGTTTTCTGGAGCAATCCCTGATATTTCACAACTACTGTTGTTGTCAACGCTGAATTTGAGTATGAATTCCCTAAATGGAACCATTCCATCAGCAATATTCAGCTTGAAAACACTTACTAAGCTGTACTTGCAACAAAACAAACTCCATGGCTCAATTCCCTCATCCATCAGCAGCCTGGCATATCTTATGGAACTTCAACTTGGGGAAAACCAGCTAAGTGGTCAGATACCAATAATGCCATGGAGTCTACAGATTGCTTTGAATCTCAGTAACAATCTCTTTACAGGACCTATCCCTAGCACTCTTGGTGATTTGAAGAACCTTGAAATCTTGGATCTCTCAAATAACAAATTTTCTGGAGAAATTCCTGACTCTTTGACTAAGATGTCCGCTTTGACAAAGTTGGTACTTTCTAACAATCTGCTAACTGGTGTCATTCCCCCTTTTCCTTCTCATGTTGAAGTTGATTCAAATGGAAATAATTTCAGTAATATACCATCTAGCACTTCCTCAAGATCAGTAAAGAAGGGAGATTCTGTTGTTGTGGCAATTCTTGTTGCAATCGCAGTGGCTGTTTTTCTTGTTGGCCTGGTCACTCTGCTGGTTGTATTAATCTCACGACGCTTATACAGGGTTAATGATGAACACTTACAGCCGCATGATGATCTTCAGCCCCCTCAGGTCATCCAAGGTAACTTGTTAACTCCAAATGGAATTCACCGATCAAACGTTGATTTCTCCAAGGCCATGGAAGCTGTTGCTGAACATTCAAACATTACTCTGAAAACTAGATTTTCGACTTATTATAAGGCCATTATGCCATCTGGGTCAATCTATTTTGTCAAGAAACTCAACTGGAGTGACAAGCTATTCCCACTGGGCAGTCATGATAAATTTGGAAAAGAGCTAGAGGGCTTGGCAAAATTGAACAATTCAAATGTTATGACTCCTTTAGCTTATGTTCTGTCCACTGACAGTGCTTATATATTGTATGAATTTGTCTCAAATGGCTCTCTTTATGATGCTCTTCATGGAAGCACGGGAATCTCTTTAGATTGGGCTAGCAGATATAGTGTAGCAGTTGGGGTGGCTCAAGGTCTCTCTTTCCTTCATGGATTTGCCTCTGGTCCAATACTTCTCCTTGACCCGTCAAGCAAAAGTATAATGCTGAAGTCCTTCAAGGAGCCTCTGGTTGGGGATATTGAACTCTATAAGGTGATTGATCCCTCAAAGAGTACAGGAAGTTTTTCTGCTGTTGCTGGTTCTGTTGGTTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACAATGGCTGGGAATGTATACAGCTTTGGGGTAATCCTGCTCGAATTGCTGACCGGAAAACCTGCGGTGACTGATGGAACCGAATTGGTCAAGTGGGTATTGCGTAACTCGACAAAGCAAGATCACATTCTGGATTTCAATGTCAGTAGAACATCGCAGGCTGTGAGAAACCAGATGCTTGCAATCCTTCGGATTGCTCTTGTTTGTGTTAGTACATCCCCAGAAGCAAGACCAAAGATGAAGAGTGTGCTACGCATGCTCCTGAATGCAAGATACTCATATCCTTGTTTTTGA 2853 0.4185 MGRYGYNTFLLFVSLCFLFCPMVQSLLSQNQTNTMTTLSQLLRGTDVPWNVISHPNPCLWKGVICDPTNTSITEIVLSGHSLTSSEFLHVLCQIETLQHLDLSRNHLDSIPDAFITECGKIEGLKMLNFSGNVIRGSFPTFHGFVGLESLDMSYNSFQGKIDSQLAGLVNLKRLNLSFNGFNGPLPTKLGNSLALEQLVLSVNHFDGTIPDEILRYKNLFLLDLGTNNLTGSISSNIGSLSKLDTLILSSNNLTGEIPTTLLNITTLTRFAANSNKFNGSVPSGITESLQSLDLSYNELSGPIPEDLLSQRHLQLVDLSNNLLAGRLPASISSSIIRLRLGYNNLSGEIAPTIFTAYQKLMYMELERNNLNGSIPPEVGSCQNLSLLNLANNQLIGELPTKLGSLSKLQVLQLQMNKFSGAIPDISQLLLLSTLNLSMNSLNGTIPSAIFSLKTLTKLYLQQNKLHGSIPSSISSLAYLMELQLGENQLSGQIPIMPWSLQIALNLSNNLFTGPIPSTLGDLKNLEILDLSNNKFSGEIPDSLTKMSALTKLVLSNNLLTGVIPPFPSHVEVDSNGNNFSNIPSSTSSRSVKKGDSVVVAILVAIAVAVFLVGLVTLLVVLISRRLYRVNDEHLQPHDDLQPPQVIQGNLLTPNGIHRSNVDFSKAMEAVAEHSNITLKTRFSTYYKAIMPSGSIYFVKKLNWSDKLFPLGSHDKFGKELEGLAKLNNSNVMTPLAYVLSTDSAYILYEFVSNGSLYDALHGSTGISLDWASRYSVAVGVAQGLSFLHGFASGPILLLDPSSKSIMLKSFKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTDGTELVKWVLRNSTKQDHILDFNVSRTSQAVRNQMLAILRIALVCVSTSPEARPKMKSVLRMLLNARYSYPCF 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1377 950 SUPERFAMILY RNI-like 257 583 - -
Bisa01g1377 950 SUPERFAMILY Protein kinase-like (PK-like) 682 941 IPR011009 -
Bisa01g1377 950 PRINTS Leucine-rich repeat signature 289 302 - -
Bisa01g1377 950 PRINTS Leucine-rich repeat signature 522 535 - -
Bisa01g1377 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 751 947 - -
Bisa01g1377 950 Pfam Leucine rich repeat 504 559 IPR001611 GO:0005515
Bisa01g1377 950 Pfam Leucine rich repeat 96 156 IPR001611 GO:0005515
Bisa01g1377 950 ProSiteProfiles Protein kinase domain profile. 671 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1377 950 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Bisa01g1377 950 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 329 581 - -
Bisa01g1377 950 Gene3D Ribonuclease Inhibitor 425 500 IPR032675 -
Bisa01g1377 950 Gene3D Ribonuclease Inhibitor 501 598 IPR032675 -
Bisa01g1377 950 Pfam Protein tyrosine and serine/threonine kinase 713 940 IPR001245 GO:0004672|GO:0006468
Bisa01g1377 950 PANTHER LEUCINE RICH REPEAT KINASE 2 69 235 - -
Bisa01g1377 950 Gene3D Ribonuclease Inhibitor 287 424 IPR032675 -
Bisa01g1377 950 SUPERFAMILY L domain-like 51 330 - -
Bisa01g1377 950 ProSiteProfiles Leucine-rich repeat profile. 524 546 IPR001611 GO:0005515
Bisa01g1377 950 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 187 - -
Bisa01g1377 950 Gene3D Phosphorylase Kinase; domain 1 655 750 - -
Bisa01g1377 950 Gene3D Transferase(Phosphotransferase) domain 1 751 947 - -
Bisa01g1377 950 Gene3D Ribonuclease Inhibitor 187 286 IPR032675 -
Bisa01g1377 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 281 - -
Bisa01g1377 950 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Bisa01g1377 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 639 750 - -
Bisa01g1377 950 SMART LRR_typ_2 405 428 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 522 546 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 94 116 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 168 192 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 286 310 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 452 476 IPR003591 -
Bisa01g1377 950 SMART LRR_typ_2 240 264 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1377 Bisa-ChrBisa01 23009887 23013412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1377 147 944 Receptor kinase-like Gene Family AT2G41820 38.278 2.18e-152 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g1377 PK_Tyr_Ser-Thr 2.7e-19 CL0016