Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1362 ATGGGTCTTATTGTTAAGGGGAGTCACGTCACTTTCCACGTTATAGCGCGAAGGCGTTTTGACTGCGTTCGGGCAGCGGTCAGCACCGTTGGGGCAGGCTCCTCTCTCAGCTCATCCTCTCACATACACTCTTTAGAAGATTTTTGCCTACTTACTTGGATGGAGACAAAGGTCTGGGCTTCAGCTTTCATCTGGTGGGTCTTGTTAGTTCGTCCATTGTGGCTGATTTCTGCTAACATTGAAGGGGATGCTTTACATACCCTGAGGACAAATTTACAGGATCCTAACAATGTCTTACAAAGTTGGGATCCTACCCTTGTCAATCCATGCACATGGTTTCACGTAACATGCAACAATGATAATAGTGTAATAAGAGTTGATCTTGGAAATGCTGATTTATCTGGTCAACTTGTTCCACAGCTTGGCCAGCTCAAGAATTTGCAGTACTTGGAACTGTACAGCAATAACATTACTGGCCCAATTCCAAGTGACTTGGGGAATCTTACTAGCTTGGTGAGCTTGGATCTGTACTTAAACAGTTTCACTGGTCCCATCCCATATACATTGGGCAAGTTGTCAAAGTTGCGTTTTCTCCGGCTTAATAACAACAGCCTTTCGGGTTCCATTCCCATGTCATTGACCAATATTTCATCTCTCCAAGTGCTGGATTTATCTAATAACCGTCTCTCTGGGGTGGTTCCTGATAATGGTTCCTTCTCATTATTCACTCCTATCAGTTTTGCTAACAACTTGGGTCTCTGTGGGCCAGTTACTGGGCGCCCTTGTCCTGGCTCTCCTCCATTTTCTCCTCCTCCCCCTTTTGTCCCACCACCCCCAATTTCTACTCCAGGAGGTAATAGTGCCACTGGGGCAATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAGTTTTTCTTTGATGTGCCTGCCGAAGAGGATCCTGAAGTTCATCTCGGGCAGCTCAAGAGGTTCTCACTACGTGAACTGCAAGTTGCTACAGATAGTTTCAGCAATAAGAACATTCTGGGAAGGGGTGGATTTGGTAAAGTATACAAAGGACGCTTAGCAGATGGTTCATTAGTTGCTGTGAAAAGACTGAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCCGTGCATCGAAATCTTCTCCGTTTACGTGGGTTCTGTATGACACCCACTGAAAGGCTGCTTGTTTATCCCTACATGGCTAATGGGAGTGTTGCATCATGCTTAAGAGAGCGTCCAACACATCAACCTCCCCTAGATTGGCCAACAAGGAGGAGAATTGCATTGGGATCTGCAAGGGGGCTTTCATATTTGCACGATCATTGTGATCCCAAGATTATTCATCGGGATGTGAAAGCTGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTAGCAAAACTCATGGATTACAAGGATACCCATGTGACAACTGCTGTGCGGGGCACAATTGGGCACATAGCTCCAGAGTACCTATCTACTGGCAAATCTTCTGAGAAAACTGATGTTTTCGGGTATGGCATCATGCTTCTGGAGCTGATCACTGGACAGAGAGCTTTTGACCTTGCTCGCCTTGCAAATGATGATGATGTTATGTTGCTTGATTGGGTAAAAGGACTTCTGAAGGAGAAAAAGCTAGAAATGCTGGTTGATCCTGATCTACAAAACAATTATGTTGAATCTGAGGTAGAACAGCTAATCCAGGTTGCACTGCTTTGCACACAAGGTTCCCCTTTGGACCGACCTAAGATGTCAGAAGTCGTGAGAATGCTCGAAGGCGATGGCTTGGCCGAGAGATGGGATGAGTGGCAGAAGGTGGAAGTGTACCGCCAAGAAGTGGAGCTGGCACCACATCCTGGTTCAGATTGGCTGGTTGACTCAACCGAAAATCTACATGCAGTTGAGTTATCTGGTCCAAGGTGA 2034 0.4646 MGLIVKGSHVTFHVIARRRFDCVRAAVSTVGAGSSLSSSSHIHSLEDFCLLTWMETKVWASAFIWWVLLVRPLWLISANIEGDALHTLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPYTLGKLSKLRFLRLNNNSLSGSIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLGLCGPVTGRPCPGSPPFSPPPPFVPPPPISTPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPTHQPPLDWPTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVESEVEQLIQVALLCTQGSPLDRPKMSEVVRMLEGDGLAERWDEWQKVEVYRQEVELAPHPGSDWLVDSTENLHAVELSGPR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1362 677 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 64 639 - -
Bisa01g1362 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Bisa01g1362 677 SMART serkin_6 354 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1362 677 ProSiteProfiles Leucine-rich repeat profile. 218 239 IPR001611 GO:0005515
Bisa01g1362 677 SUPERFAMILY L domain-like 82 243 - -
Bisa01g1362 677 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Bisa01g1362 677 FunFam Somatic embryogenesis receptor-like kinase 1 431 648 - -
Bisa01g1362 677 FunFam Somatic embryogenesis receptor kinase 1 323 430 - -
Bisa01g1362 677 Pfam Protein kinase domain 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1362 677 SUPERFAMILY Protein kinase-like (PK-like) 333 629 IPR011009 -
Bisa01g1362 677 Pfam Leucine Rich Repeat 218 235 IPR001611 GO:0005515
Bisa01g1362 677 FunFam Somatic embryogenesis receptor kinase 1 77 264 - -
Bisa01g1362 677 Gene3D Transferase(Phosphotransferase) domain 1 431 648 - -
Bisa01g1362 677 ProSiteProfiles Protein kinase domain profile. 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1362 677 Pfam Leucine rich repeat N-terminal domain 81 118 IPR013210 -
Bisa01g1362 677 Gene3D Ribonuclease Inhibitor 77 264 IPR032675 -
Bisa01g1362 677 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1362 Bisa-ChrBisa01 22719960 22727443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1362 62 677 Receptor kinase-like Gene Family AT1G71830 89.176 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa01g1362 Pkinase 9e-44 CL0016