Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1361 ATGTATCTTGGGGTGAGAAGAAGGCCATGGGGAAGATATGCTGCTGAGATAAGGAACCCTTATACCAAAGAGAGACGTTGGCTGGGCACATTTGATACTGCTGAGGAGGCTGCCATAGCTTACGATCTCTCATCCATCAACATTTGTGGCATCCAAAATGCTCGCACCAATTTTCATTACCCTTTTATATATGTTCCTCTACCTTTGAAGCCACTGCTGCCGCCACTACCATCGCCGTCGTTGGAGGGTTATGGAGTTTGCCATGAGATGAATGCTGTTGATGACTGCTGTGATGAGTCTCAGAAGGCTCCTGCATAG 318 0.4748 MYLGVRRRPWGRYAAEIRNPYTKERRWLGTFDTAEEAAIAYDLSSINICGIQNARTNFHYPFIYVPLPLKPLLPPLPSPSLEGYGVCHEMNAVDDCCDESQKAPA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1361 105 Gene3D AP2/ERF domain 1 60 IPR036955 GO:0003700|GO:0006355
Bisa01g1361 105 SUPERFAMILY DNA-binding domain 2 60 IPR016177 GO:0003677
Bisa01g1361 105 PRINTS Ethylene responsive element binding protein signature 24 40 IPR001471 GO:0003700|GO:0006355
Bisa01g1361 105 PRINTS Ethylene responsive element binding protein signature 2 13 IPR001471 GO:0003700|GO:0006355
Bisa01g1361 105 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 83 - -
Bisa01g1361 105 ProSiteProfiles AP2/ERF domain profile. 1 59 IPR001471 GO:0003700|GO:0006355
Bisa01g1361 105 SMART rav1_2 1 65 IPR001471 GO:0003700|GO:0006355
Bisa01g1361 105 CDD AP2 2 58 IPR001471 GO:0003700|GO:0006355
Bisa01g1361 105 Pfam AP2 domain 4 45 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1361 Bisa-ChrBisa01 22667336 22668103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1361 2 60 AP2-EREBP Transcription Factor Family AT1G12890 76.271 1.48e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1361 AP2 6.4e-10 CL0081