Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1354 ATGCCTTCTCTTCCCTTCCCCACCTATGTCTTCGGCGACTCTCTGGTGGATTCTGGAAACAACGACTACATTTTCTCCCTTTCTAAAGCCAATTCGCCTCCTTACGGCATCGATTTTCAGCCGTCTGGAGGGAGGCCTACCGGAAGATTCACCAATGGCCGAACCATTTCAGATTTAATTGGGGAAGCTATGGGATCAAAGTCATTTCCTCCACCTTATCTGGCCCCAGATGCTACCAAAGATGCAATTCATAAAGGAGTAAACTATGCTTCTGGTGCCTCAGGCATACTGGACGAAACGGGAATCCTATTTATCGGAAGAGTTCCACTATCAGAGCAAGTGAAATACTTCGAGAAAACCAGAAGTTACTTGGCGAAGCTTATGGGAGAAAATGGTACAATGGGAGTTCTAAACAAGGCAATCCTCTCCGTCACAACAGGCTCCAACGATGTGCTCAACTATATCACTCCAGACCTTCCCTTCTTGGAGCGTGACAAACCTCCTCCCGAAGCCTTTCAAGAATTTTTGGTATCCAATTTGACCATACACCTCAAGGTGGAGAATGCTCCTTGGAGGGGATTTCTTTTGGTAGGTTTTGAGAATGCGGTTAGTCCGTGTTGTGGCGGATACTTCCCTCCATTTCTTTGCTTTCAACGACCAAATGCGATGGCAAGTGCAGTTTTTTGCCAAAATCGATCAAACTATTTGTTCTGGGACGCCTATCACCCAACAGAAGCAGCTAATGTTATCATAGCAAAAGAGTTGCTCGACGGTGGTCGTACCGTCACTTTTCCTATTAATTCAGATCTCTTAGTACATTCTCAATTGAGAGAATCGGAGAGGTGGATGGAGATGTCATTGTTGGGGCCAAGGTCGGAACTGGTGAGACCTGTCGAGGACAATGACTTTAGGGAACACAAAATAATGAGTTCCAAAGATGCCAATGAAGATTGCGTAGGATGGGCAGCAAGAGATGCATCGGGAGTTCTATCCCCCTACAAATTCAGTCGCAGGGCTCTTGGGAACGATGATGTTTTTATAAAAATTACACACTGTGGAGTATGTTATGCTGATGTAAGTTGGACGAGGAATAAACTTGGTGACTCAAAGTATCCTTTAGTACCCGGACATGAGATTGCTGGAATTGTGCAGAAGGTTGGTTCCAATGTTCGTCGCTTCAACGTTGGCGATCATGTTGGAGTGGGAACATATGTTAATTCATGCAGGGATTGCCAATATTGTAATGATGGAATAGAAGTCCATTGTGTGAAGGGATCAGTTTATACTTTTAATGGTGTTGATTTTGATGGCACAATCACAAAAGGAGGATACTCCAATTACATAGTAGTCCATGAAAGGTATTGCTTCATGATACCCAAAAATTATCCACTGGCTTCAGCTGCTCCTTTGCTTTGCGCTGGAATTACCGTTTATGCTCCCATGATGCGCCACAAGATGAATCAACCTGGTAAATCCCTGGGAGTGATTGGCCTGGGTGGCCTTGGTCATTTGGCAGTAAAATTTGGGAAGGCTTTTGGGTTGAATGTAACAATTTTCAGCACAAGCATGTCCAAGAAAGAGGAGGCCCTAAGTGTGCTTGGTGCAGACAAATTTGTTCTGTCCTCTGACCAACAGCAGATGATGGCATTGGCCAAGTCTCTCGACTTCATAGTTGACACAGCATCTGGTGATCACCCATTTGATCCATACATGTCACTTTTGAAGACCTCCGGTGTCCTAGTCCTAGTTGGGTTCCCAAGCGAGGTTAAATTTAGCCCCGCAAGCCTTAATCTGGGTATGAGAACCATATCCGGAAGCGTTACAGGTGGCACCAAAGAGACTCAGGAGATGATTAATTTCTGTGCTGAAAATAGAATTTACCCAAATATAGAAGTTATTCCAATAGAATATATAAATGAAGCTCTTCAGAGGCTAGTAAATAGCGATGTGAAATATCGGTTCGTGATAGATATTGAAGACTCCTTAAAATAG 1992 0.4408 MPSLPFPTYVFGDSLVDSGNNDYIFSLSKANSPPYGIDFQPSGGRPTGRFTNGRTISDLIGEAMGSKSFPPPYLAPDATKDAIHKGVNYASGASGILDETGILFIGRVPLSEQVKYFEKTRSYLAKLMGENGTMGVLNKAILSVTTGSNDVLNYITPDLPFLERDKPPPEAFQEFLVSNLTIHLKVENAPWRGFLLVGFENAVSPCCGGYFPPFLCFQRPNAMASAVFCQNRSNYLFWDAYHPTEAANVIIAKELLDGGRTVTFPINSDLLVHSQLRESERWMEMSLLGPRSELVRPVEDNDFREHKIMSSKDANEDCVGWAARDASGVLSPYKFSRRALGNDDVFIKITHCGVCYADVSWTRNKLGDSKYPLVPGHEIAGIVQKVGSNVRRFNVGDHVGVGTYVNSCRDCQYCNDGIEVHCVKGSVYTFNGVDFDGTITKGGYSNYIVVHERYCFMIPKNYPLASAAPLLCAGITVYAPMMRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTIFSTSMSKKEEALSVLGADKFVLSSDQQQMMALAKSLDFIVDTASGDHPFDPYMSLLKTSGVLVLVGFPSEVKFSPASLNLGMRTISGSVTGGTKETQEMINFCAENRIYPNIEVIPIEYINEALQRLVNSDVKYRFVIDIEDSLK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1354 663 CDD CAD1 319 657 IPR047109 GO:0016616
Bisa01g1354 663 PANTHER ALDEHYDE REDUCTASE 315 661 IPR047109 GO:0016616
Bisa01g1354 663 FunFam Putative cinnamyl alcohol dehydrogenase 6 629 658 - -
Bisa01g1354 663 Gene3D - 321 658 - -
Bisa01g1354 663 Coils Coil 659 663 - -
Bisa01g1354 663 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 463 626 IPR036291 -
Bisa01g1354 663 FunFam Cinnamyl alcohol dehydrogenase 473 628 - -
Bisa01g1354 663 Pfam GDSL-like Lipase/Acylhydrolase 197 254 IPR001087 GO:0016788
Bisa01g1354 663 Pfam GDSL-like Lipase/Acylhydrolase 9 164 IPR001087 GO:0016788
Bisa01g1354 663 SUPERFAMILY GroES-like 324 491 IPR011032 -
Bisa01g1354 663 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 376 390 IPR002328 GO:0008270|GO:0016491
Bisa01g1354 663 Gene3D SGNH hydrolase 8 186 IPR036514 -
Bisa01g1354 663 Gene3D SGNH hydrolase 194 259 IPR036514 -
Bisa01g1354 663 Gene3D - 473 628 - -
Bisa01g1354 663 Pfam Alcohol dehydrogenase GroES-like domain 343 456 IPR013154 -
Bisa01g1354 663 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 493 520 IPR029752 -
Bisa01g1354 663 Pfam Zinc-binding dehydrogenase 500 622 IPR013149 -
Bisa01g1354 663 SMART PKS_ER_names_mod 328 656 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1354 Bisa-ChrBisa01 22499105 22507699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1354 310 663 Monolignol Biosynthesis Gene Families AT1G72680 74.576 0.0 545