Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1314 ATGGAGTTTGTACGCATTTTCTTCTCCATTTTCCTGTTGGGTTTGATTTTCTGGCAAGGAAATGCTGAACCTATTGAAGATAAACTGGCATTGCTGGACTTCGTGTACAATTTTCCTCCCTCTCGTCCTCTCAATTGGATTGAAGGTTCTTCAGTGTGTAATGACTGGACTGGAGTGACTTGTAACGAAGATGGGTCTCGAGTAATAGCCGTCCGATTGCCCGGAGTCGGATTCGTCGGCGAGATTCCACCGAACACAATCAGTCGCCTCTCTTCGCTGCAGATTTTGAGTCTCAGATCCAATGTTATCAGCGGCAATTTTCCTTCTGATTTCTCGAATCTCAAAAACTTGTCTTTCCTTTATCTCCAGTTTAACCAATTATCGGGTCCTTTGCCAGTTTTCTCGGTTTGGAAGAATCTGACTAGTGTCAATCTGTCCAGTAATCGTTTCAATGGGAGTATTCCTTCCTCGCTTTCCAATCTGACAATGCTTACAAGTTTGAATCTTGCAAATAACTCGCTTTCTGGTGAAATTCCTGATCTGCAGTTACCCAGATTGCAGCAGCTGAATCTGTCGAACAACAATCTCCACGGTGTCGTGCCTAAATCCTTACAAAAGTTTCATAAGTCAGCATTCCTTGGGAATAACATTTCTCTAGGAACTTCTCATGATCTTTCCCCTACACTTCCACCCTCTTCCCAGCCGTCTTCAAAATCTAGGAAAGATCGAAGATTAAGTGAAACGGCACTTCTGGGTATAACAATTGGTGGTGGTGTTCTAGGCCTAGTAGTGTTCACTTGTTTCATAGTCGTTTGCAGCTCAAGGAGGAGGAACGAAGATGGGCATTCTGGGAATTTGCACAAGGGAGGAATGTCTCCGGATAAAGAAGTTTCGAGGGACCAAGATGCAAATAATAAGCTGGTTTTCTTCGAGGGGTGCAGCTATGCGTTTGACTTGGAAGACTTGTTGAGGGCTTCTGCTGAGGTACTAGGGAAGGGAACGTTTGGTGCAGCATACAAGGCCACACTAGAGGATGCAACCACTGTTGTAGTGAAGAGGTTGAAGGAAGTAGCCGTTGGAAGGAAGGATTTTGAGCAACACATGGAATTTTCGGGAAGTCTTAAGCACGAGAATGTGGTTGAGCTCAAGGCGTATTACTATTCCAAAGATGAGAAGTTGATGGTGTATGATTACTACAGTCAGGGAAGCGTCTCTTCTTTGTTGCACGGTAAAAGAGGAGAGGAGAGGGTTCCTCTGGACTGGGACACTCGGCTCAGGATTGCTCTGGGTGCTGCAAGAGGCATAGCTCATATCCATTCCTCAAATAACGGAAAGCTGGTACACGGCAACATCAAATCCTCAAACATCTTCCTCAACTCAAAGCAATACGGTTGTATCTCCGACCTCGGCCTCGCAACCATAATGAGCTCCATAGCCCTCCCCATCTCACGTGCAGCTGGGTACCGTGCCCCTGAAATCACAGACACCAGGAAAGCCACACAGCCTGCAGACGTCTACAGCTTCGGGGTGGTGTTGCTGGAGCTCCTCACCGGGAAGTCCCCGATCCACACGGCGGCCGGGGGCCACGAGATCGTGCACCTGGTGAAGTGGGTTTATTCGGTTGTGCGAGAGGAGTGGACGGCGGAGGTGTTTGACTTGGAGCTGATGAAGTACCCGAATATAGAGGAAGAGATGGTGGAGATGCTGCAGATAGCGATGTCGTGTGTGGTGAGGATGCCTGATCAGAGACCACACATGCCACAGGTCGTGAAGATGATAGAAAATGTGAGGCAGATTGTTACGGAGAATCGGCCATCGTCTGAGAACTCAGCTGAAAGCCGAACTCAACGTTGA 1854 0.4768 MEFVRIFFSIFLLGLIFWQGNAEPIEDKLALLDFVYNFPPSRPLNWIEGSSVCNDWTGVTCNEDGSRVIAVRLPGVGFVGEIPPNTISRLSSLQILSLRSNVISGNFPSDFSNLKNLSFLYLQFNQLSGPLPVFSVWKNLTSVNLSSNRFNGSIPSSLSNLTMLTSLNLANNSLSGEIPDLQLPRLQQLNLSNNNLHGVVPKSLQKFHKSAFLGNNISLGTSHDLSPTLPPSSQPSSKSRKDRRLSETALLGITIGGGVLGLVVFTCFIVVCSSRRRNEDGHSGNLHKGGMSPDKEVSRDQDANNKLVFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKATLEDATTVVVKRLKEVAVGRKDFEQHMEFSGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSLLHGKRGEERVPLDWDTRLRIALGAARGIAHIHSSNNGKLVHGNIKSSNIFLNSKQYGCISDLGLATIMSSIALPISRAAGYRAPEITDTRKATQPADVYSFGVVLLELLTGKSPIHTAAGGHEIVHLVKWVYSVVREEWTAEVFDLELMKYPNIEEEMVEMLQIAMSCVVRMPDQRPHMPQVVKMIENVRQIVTENRPSSENSAESRTQR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1314 617 Pfam Leucine Rich Repeat 185 207 IPR001611 GO:0005515
Bisa01g1314 617 FunFam pollen receptor-like kinase 1 293 398 - -
Bisa01g1314 617 MobiDBLite consensus disorder prediction 277 298 - -
Bisa01g1314 617 SUPERFAMILY Protein kinase-like (PK-like) 328 593 IPR011009 -
Bisa01g1314 617 Gene3D Ribonuclease Inhibitor 136 226 IPR032675 -
Bisa01g1314 617 SUPERFAMILY L domain-like 37 209 - -
Bisa01g1314 617 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 607 - -
Bisa01g1314 617 Gene3D Transferase(Phosphotransferase) domain 1 400 615 - -
Bisa01g1314 617 Pfam Leucine rich repeat 81 127 IPR001611 GO:0005515
Bisa01g1314 617 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Bisa01g1314 617 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Bisa01g1314 617 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Bisa01g1314 617 PANTHER OS05G0588300 PROTEIN 6 607 - -
Bisa01g1314 617 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Bisa01g1314 617 MobiDBLite consensus disorder prediction 223 243 - -
Bisa01g1314 617 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Bisa01g1314 617 ProSiteProfiles Protein kinase domain profile. 324 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1314 617 Pfam Protein kinase domain 327 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1314 617 PRINTS Leucine-rich repeat signature 164 177 - -
Bisa01g1314 617 PRINTS Leucine-rich repeat signature 183 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1314 Bisa-ChrBisa01 21858252 21861741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1314 1 611 Receptor kinase-like Gene Family AT4G23740 64.444 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa01g1314 Pkinase 2.5e-35 CL0016