Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1299 ATGGAACAGAAAAGCATATTGCTATCGGCGTTGAGTGTTGGGGTGGGAGTGGGGATTGGGTTGGCTTCTGGACAAAACGTAGGCAAATGGGGAGCTTATTCTGGTTCCTTAAACGACAACATTACGGCCGAAAAGATGGAGCAGGAAATGCTCCGACTAGTTATTGATGGCAGAGAGAGCAAGGTCACCTTCGATAAATTCCCTTATTATCTCAGTGAGCAGACACGGGTGTTGCTGACAAGTGCTGCTTATGTCCACTTAAAGCATGCTGATGTCTCTAAATTTACACGTAATCTTTGTCCTGCAAGCCGGACTATTCTACTCTCTGGGCCAGCAGAACTTTACCAACAGGTGCTTGCCAAAGCTTTAGCTCATTACTTTGAGGCAAAGTTGCTTCTGTTAGATCTAACTGACTTTTCATTGAAGATCCAGAGTAGATATGGTTCCAGCAAAGAATCTGGTTTCAAAAGGTCCACTTCGGAGACAACTTTGGAGAGACTATCTGGCTTATTGGGATCATTTTCAAATTCAATCTTTCCACAGAGAGAAGAACCTAAAGGAAAAATGCACAGGCAAAGCAGTGGAGTGGACCTCCGATCAATGGGGACTGATGGATCTTGTCATCCTCCCAAGCTTCGTAGGAATGCTTCTGCCTCTGCAAATATCAGTAGCCTTGGTATGCAAAGCAATCCTACTAATCCAGTTTCTCTTAAGCGCACAACCAGCTGGTCTTTTGACGAAAAGCTTCTCATACAGTCCCTTTACAAGGTTCTGGTTTTTGTGTCAAAAACCTATCCTATTGTGCTGTATCTGCGGGATGTTGATAAGTTGTTATGTAGATCACAAAGGATTTATAAGTTGTTCCAGAAAATGTTGGAGAAAATATCTGGACCAGTTTTGATTCTTGGTTCACGAGTTCTGGATTCTGGCGATGACTACAGAGAGGTGGATGAGAAAGTTGGTTCGGTCTTCCCATACAACATAGAAATTAAACCTCCAGAAGATGAATCCCATCTTATCAGCTGGAAATCTATATTGGAAGAGGATATGAAGAAGATACAAATTCAGGATAACAAAAACCATATTATGGAAGTACTTGCAGCCAATGATCTTGATTGTGATGATTTGGATTCCATCTGTGTGGCAGATACAATGGTTCTCAGTAATTACATAGAAGAGATTGTTGTATCAGCAATTTCTTATCATTTAATGAAAAACAAAGACCCAGAATACAGAAATGGGAAACTTGTTATTTCATCCGATAGTTTATCCCGAGCATTGAATATATTCCAGGAGGGTAAATCCAATGGAAAAGATAAATTAAAATTGGAAGCTCAAGCTTTAAAATCTGAGAAGGAAAAAGGGGAAGGAGCTACAGTGAAACCTGAAGCCAAGTCTGGAAATGCAGCTCCTGAAAAGAAAGCCGAAGAAGAAGTACTACCGACTTCAGTGGCAAAGTCAGAGAATGAAACTTCAGTTCCTCCAGAACCTAAAGTTCCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCCGAGGTAATACCAGCAAATGAGATTAATGTAACATTCACTGATATTGGTGCCTTAGACGAGGTCAAAGAATCCCTTCAGGAGCTAGTAATGCTGCCACTTCGAAGGCCAGACCTTTTCACTGGAGGCCTTCTGAAGCCTTGTAGAGGAATATTGCTTTTTGGACCTCCTGGCACTGGGAAGACAATGCTGGCGAAGGCCATTGCAAGGGAGGCTGGAGCAAGTTTCATCAATGTGTCCATGTCTACCATCACCTCCAAATGGTTTGGTGAAGATGAAAAGAATGTTCGAGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTCGATGAGGTTGATAGCATGCTTGGGCAGCGGACAAGAGTTGGAGAGCATGAAGCCATGCGGAAAATAAAGAATGAATTCATGACTCATTGGGATGGGCTCATGACAAAACCAGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCTTTTGATCTGGATGAAGCAATTATTAGGCGATTTGAAAGGAGAATTATGGTAGGGGTGCCATCCCTGGCGAACAGGGAAAAGATTTTGAGGACTCTTTTATCAAAAGAGAAGGTGGACGATGTAGTTGACTTTAAGGAACTAGCAACTATGACAGAAGGATATACAGGAAGTGACCTAAAGAACTTTTGCACAACTGCTGCATATCGACCTGTCAGAGAGTTAATTCAGCAAGAGAGACTTAAGACGCTGGAGAGAAAGAAGAAAGCTGCCAAAGGACGTAACGAAGATGTCCAAGAAAAACAATCTACTGTAGGATATGCCCCAGATGCTGTGGATGCAGAAGATAAACAGGAAAGAGTTATTACCCTTAGGCCATTGAACATGCAGGACTTCAGAGAGGCAAAGAATCAGGTTTCCGCAAGCTTTGCAGCTGAGGGAGCAGGTATGCAAGAGCTGAAGCAGTGGAACGATTTGTATGGGGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTACTTCCTATGA 2553 0.4266 MEQKSILLSALSVGVGVGIGLASGQNVGKWGAYSGSLNDNITAEKMEQEMLRLVIDGRESKVTFDKFPYYLSEQTRVLLTSAAYVHLKHADVSKFTRNLCPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSSKESGFKRSTSETTLERLSGLLGSFSNSIFPQREEPKGKMHRQSSGVDLRSMGTDGSCHPPKLRRNASASANISSLGMQSNPTNPVSLKRTTSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDKLLCRSQRIYKLFQKMLEKISGPVLILGSRVLDSGDDYREVDEKVGSVFPYNIEIKPPEDESHLISWKSILEEDMKKIQIQDNKNHIMEVLAANDLDCDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVISSDSLSRALNIFQEGKSNGKDKLKLEAQALKSEKEKGEGATVKPEAKSGNAAPEKKAEEEVLPTSVAKSENETSVPPEPKVPEVPPDNEFEKRIRPEVIPANEINVTFTDIGALDEVKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGVPSLANREKILRTLLSKEKVDDVVDFKELATMTEGYTGSDLKNFCTTAAYRPVRELIQQERLKTLERKKKAAKGRNEDVQEKQSTVGYAPDAVDAEDKQERVITLRPLNMQDFREAKNQVSASFAAEGAGMQELKQWNDLYGEGGSRKKEQLSYFL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1299 850 MobiDBLite consensus disorder prediction 467 483 - -
Bisa01g1299 850 SMART AAA_5 560 697 IPR003593 GO:0016887
Bisa01g1299 850 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 523 697 - -
Bisa01g1299 850 Pfam AAA+ lid domain 718 757 IPR041569 -
Bisa01g1299 850 MobiDBLite consensus disorder prediction 449 506 - -
Bisa01g1299 850 Coils Coil 438 458 - -
Bisa01g1299 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 761 IPR027417 -
Bisa01g1299 850 MobiDBLite consensus disorder prediction 177 213 - -
Bisa01g1299 850 Pfam ATPase family associated with various cellular activities (AAA) 564 694 IPR003959 GO:0005524|GO:0016887
Bisa01g1299 850 Coils Coil 756 776 - -
Bisa01g1299 850 ProSitePatterns AAA-protein family signature. 667 686 IPR003960 GO:0005524|GO:0016887
Bisa01g1299 850 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 849 - -
Bisa01g1299 850 Gene3D - 696 778 - -
Bisa01g1299 850 Gene3D - 523 779 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1299 Bisa-ChrBisa01 21523480 21531262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1299 524 766 Calmodulin-binding Proteins AT3G56690 39.024 2.84e-43 168