Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1289 ATGGGTGGTCACCATACTTGCTGCAACCAACAGAAGGTTAAAAGAGGGCTTTGGTCTCCCGAGGAAGACGAGAAACTCATCCGATACATCTCCACTCATGGCTATGGCTGTTGGAGTGAGGTTCCAGAGAAAGCTGGGCTTCAAAGGTGTGGGAAGAGTTGTCGGTTGAGATGGATTAATTATTTGAGGCCCGATATTAGAAGAGGCAGGTTCACTCCTGAGGAGGAGAAGTTAATTATCAGTCTCCATGGGGTCGTAGGCAACAGATGGGCTCACATAGCAAGTCACTTGCCTGGTAGAACTGACAACGAAATAAAGAATTATTGGAATTCCTGGATCAAAAAGAAAATAAGGAAGTCTTTGGTGGCTTCAACCACCCCTTCACAAAGCGTGGATCATCCCCAATTCAATTATAACCTCAATCAACTAGACTTCGCCAACCAAGATAACCTAACCATTACAAAGCCACCAGCTGTTCAAGAAACCTTATTTTCACCCACATGCCCCTTATTTATGTTTGACACTGGCTCACTAGGTCACGGCACACCAACAACCGCAGACAACAACAGTACAGAACTGTTCCAAGATGGTGTTATGAGTTTGATGAGCTCGGAGACTTGGAATTTGAGCCAACATCATCAAGTCCAAGTTCAAGGCCTTTCTCCTGCAGCTGCAACAACTTTTACAGGCCTGGACACTAGGACTACGACTACTACAAATACACATTATAGTTTGCCACCTTTGATAGAGAATATGCACGTGCCATTGCAATTAGAGTCTTGTGGTATGGTGGAGGAAGGGGAAATAGATTTGGAGTGCTTGAGGAGGCAAGAGCTGAATATTGATTGGGTTGAGACAGGCCAGCAACAATGTCCAAACTTTCTGTTCTGGGATAACGTTGGTGGGGAAGAGATGATGGCACCTAATTCTTCAACAAATGTGGGAGCTGATACACTTTCTTCTTTTCCTTCGACTTTGTGA 981 0.4475 MGGHHTCCNQQKVKRGLWSPEEDEKLIRYISTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSLVASTTPSQSVDHPQFNYNLNQLDFANQDNLTITKPPAVQETLFSPTCPLFMFDTGSLGHGTPTTADNNSTELFQDGVMSLMSSETWNLSQHHQVQVQGLSPAAATTFTGLDTRTTTTTNTHYSLPPLIENMHVPLQLESCGMVEEGEIDLECLRRQELNIDWVETGQQQCPNFLFWDNVGGEEMMAPNSSTNVGADTLSSFPSTL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1289 326 MobiDBLite consensus disorder prediction 307 326 - -
Bisa01g1289 326 CDD SANT 18 62 IPR001005 -
Bisa01g1289 326 Gene3D - 69 136 - -
Bisa01g1289 326 SMART sant 14 64 IPR001005 -
Bisa01g1289 326 SMART sant 67 115 IPR001005 -
Bisa01g1289 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bisa01g1289 326 PANTHER MYB DOMAIN PROTEIN 55 1 221 - -
Bisa01g1289 326 Gene3D - 6 67 - -
Bisa01g1289 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa01g1289 326 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa01g1289 326 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa01g1289 326 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa01g1289 326 FunFam Transcription factor MYB26 69 138 - -
Bisa01g1289 326 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa01g1289 326 FunFam MYB transcription factor 7 67 - -
Bisa01g1289 326 CDD SANT 70 113 IPR001005 -
Bisa01g1289 326 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1289 Bisa-ChrBisa01 21407436 21409254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1289 3 300 MYB Transcription Factor Family AT1G63910 50.144 1.06e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1289 Myb_DNA-binding 2.2e-15 CL0123