Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1284 ATGAATGATAAATATTCACGCTATTTTTCTCTGGCAGCGACATATAGAATGCACCTACTATACACAGCAGGCAGTGACGGAGGCTTAGGAGTGGCCCTATTGAACAAGGCCCAGAACACCGACTTCTACAGATGCTCCTTTGAAGGCTACCAAGATTGCAAGATTTATGGCACCGTCGACTTCGTCATGGGCGACATCGCCACAGCTTTCCAAAACTTCAAGCGCAACGCTAGACCCACAGAGTTCGTGGCCTACACCGCCCAGTCCCTCATGAGTGAGGACAAGCACAAAGCTTCCAATACATATATATGTAACGAGAATATGTATATGTATGTTTTTTAA 342 0.4561 MNDKYSRYFSLAATYRMHLLYTAGSDGGLGVALLNKAQNTDFYRCSFEGYQDCKIYGTVDFVMGDIATAFQNFKRNARPTEFVAYTAQSLMSEDKHKASNTYICNENMYMYVF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1284 113 Gene3D - 7 109 IPR012334 -
Bisa01g1284 113 Pfam Pectinesterase 17 94 IPR000070 GO:0030599|GO:0042545
Bisa01g1284 113 SUPERFAMILY Pectin lyase-like 17 89 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1284 Bisa-ChrBisa01 21356616 21359091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1284 7 78 Carbohydrate Esterase AT3G10720 43.529 4.96e-14 65.1