Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1281 ATGGGATTCCCAGTGGGGTGCACCGAACTTCTGTTCCCGAAGCTGTTTCTGCAGATCCTCTCTCTATTGGGGTTCATCAGAAAAGTGATATCCGCGCTGTTTCGGTATCTCGGGCTCCACGACTTCCTGGAGCCTGACATTGGGTGGACGGAGCAATCTTCGACCCACATACCCGAATTCGAGTCGGTGAGCGCGCTGCTGATCCGGGAAATACTGCCGGTGGTGAAGTTCTCGGAGCTGGTGGAGGCTCCGGAGAGCTGCGCGGTGTGCCTGTACGAATTCGAAGCCGACGACGAGATCCGACGGCTCGCGAACTGCAGGCACATATTCCACAGGGGTTGCCTGGACCGTTGGATGGGATACGATCAGAGAACGTGTCCTCTGTGTCGAACGCCCTTCATACCTCACGATATGCAGGGAGCCTTTAACGAGAGACTCTGGGCTGCTTCTGGGATCCCTGAATTCTACGAACAAGAATCAGATTATCCTCATCTCACTGGTTTTGTGGTTGCAAAAGTGAAAGGAGAACCAAGGGCAACAGACCATCCTCTTTGCCTTGCACAGAGTCTCCTCACAGAAGGACCCATCCCCTTTGAAGAGGCAGCGATTACACTGAAGTCCTTTGGAAAATCAAATCCCATTGACTGTAAATGCCCAAGGAGGAACCCATGGGACTGCCCAAGATTAAAGTTTCTAAACATTAAGACTCACAGCAGCTTGAGCAGCCAAATGCATCACATGAGTAAATGCCGCAATCTCAAAGAGCTTCCTCAAAAAACGGAGACGATCGTCAAAGTGGAAGCAAGAATCTTCGTCCGCCGCCAAGAATCACACCACCGCGCCGGAAAAGAACCAGAGGAACCTGTGACGAAACTAAACCAGAAGAAGCACCGAATCAGCGGGGACGGCCTCTTAAAGCTCTCCTCTCTCGCCGGAAACACCAGCCCGCACCGCTTCCGATCTCCCGAAGACCCCTCGCCAAGAACAGGAGAATCCGTGACTGAAAGAAAAACAGAGGAGGGCCGAATCGCTAGGGCACAAAACAAAAAAGCAGCAGTCGACGAAGGGAGACAACAATCGAGGAAGAAGACTATGCCTACGATACCAGCAACGCCATTACCGGTCACCTCAGCACTCTTCTACCCCACACCTTCATCGGCTCCTGGTAGTTCTTGGAGCAAATAG 1185 0.5249 MGFPVGCTELLFPKLFLQILSLLGFIRKVISALFRYLGLHDFLEPDIGWTEQSSTHIPEFESVSALLIREILPVVKFSELVEAPESCAVCLYEFEADDEIRRLANCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPHDMQGAFNERLWAASGIPEFYEQESDYPHLTGFVVAKVKGEPRATDHPLCLAQSLLTEGPIPFEEAAITLKSFGKSNPIDCKCPRRNPWDCPRLKFLNIKTHSSLSSQMHHMSKCRNLKELPQKTETIVKVEARIFVRRQESHHRAGKEPEEPVTKLNQKKHRISGDGLLKLSSLAGNTSPHRFRSPEDPSPRTGESVTERKTEEGRIARAQNKKAAVDEGRQQSRKKTMPTIPATPLPVTSALFYPTPSSAPGSSWSK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1281 394 CDD RING-H2_RHA1-like 87 133 - -
Bisa01g1281 394 ProSiteProfiles Zinc finger RING-type profile. 87 130 IPR001841 -
Bisa01g1281 394 MobiDBLite consensus disorder prediction 275 394 - -
Bisa01g1281 394 SUPERFAMILY RING/U-box 68 136 - -
Bisa01g1281 394 MobiDBLite consensus disorder prediction 275 302 - -
Bisa01g1281 394 SMART ring_2 87 129 IPR001841 -
Bisa01g1281 394 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 191 - -
Bisa01g1281 394 Pfam Ring finger domain 86 130 IPR001841 -
Bisa01g1281 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 137 IPR013083 -
Bisa01g1281 394 MobiDBLite consensus disorder prediction 378 394 - -
Bisa01g1281 394 MobiDBLite consensus disorder prediction 321 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1281 Bisa-ChrBisa01 21324142 21329482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1281 1 151 C3H Transcription Factor Family AT1G63840 59.236 1.33e-56 181