Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1277 ATGTACTACTCTGCTCTTTATGATGTTTTGCCTGTTTTAGCCTGTCATCCCTTTGTTTTACTCATTGTTCTTTCTTCCTTATTGCCAGTAGTCCAAAGTATTGACTGGGTTAATGGTAATTTTCGGGCACTGGAGATAAGGGAGATGGGCGGCTGCTGTTGCTGTTGTTGTTCTCCCAGAGAAACTGAATTGAGTGCTCCACCGGCATACTACTATTACCCAAGAGCATTAGAGGAGCATATTCCCCTCTCTCTCCAAGGTGCTGCCTCTGCTTTCTCTGGGGGGCTCTTAGTTGATACTAATCTAGACACTTCGAGTCCTGATACTTATAGACCACCTCCCGCTCCTATCCCTTTTGGTGTTACGTTAGGTACCTCTCAAACGCCACCTGTGGCTCAAGGAATCTGCAGCGACAAGACTAATGCATCCTTGAATTCTACAAATTCTGATTCCGTTGAAGAAACAGTTGCTGACAGCAATGATGGGACCTTGGTTAAGTTGGAAGAGCTGAAGGAATCAGAGGGCAAAGTTCAGTCTGATATAGAAAATGACTCCGCCAAGGATTCGGAGACTGAACTTCCAAAGTTGGCAGAACCAAAGTTGGCAGAAGAGGAGGACGTTTGCCCAATTTGTTTGGAAGAGTATGATGAAGAGAACCCAAAGCTGACCACAAAATGTATCCATCACTTTCACCTGGCATGCATTTTGGAATGGATGGAAAGAAGTGAAACCTGTCCTGTCTGTGATGAGGATGTGGTTTTCGATCCCCCACTTGATTAG 780 0.4513 MYYSALYDVLPVLACHPFVLLIVLSSLLPVVQSIDWVNGNFRALEIREMGGCCCCCCSPRETELSAPPAYYYYPRALEEHIPLSLQGAASAFSGGLLVDTNLDTSSPDTYRPPPAPIPFGVTLGTSQTPPVAQGICSDKTNASLNSTNSDSVEETVADSNDGTLVKLEELKESEGKVQSDIENDSAKDSETELPKLAEPKLAEEEDVCPICLEEYDEENPKLTTKCIHHFHLACILEWMERSETCPVCDEDVVFDPPLD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1277 259 SMART ring_2 208 248 IPR001841 -
Bisa01g1277 259 Pfam Ring finger domain 207 248 IPR001841 -
Bisa01g1277 259 MobiDBLite consensus disorder prediction 172 193 - -
Bisa01g1277 259 ProSiteProfiles Zinc finger RING-type profile. 208 249 IPR001841 -
Bisa01g1277 259 CDD RING-H2_AIRP1-like 204 252 - -
Bisa01g1277 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 255 IPR013083 -
Bisa01g1277 259 SUPERFAMILY RING/U-box 197 255 - -
Bisa01g1277 259 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 89 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1277 Bisa-ChrBisa01 21285545 21287949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1277 49 259 C3H Transcription Factor Family AT5G41350 52.558 1.32e-66 204