Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1271 ATGAAAAAACAACTTGCTCTGGCCGTGAGGAGCATCCAGTGGAGCTACGCAGTATTCTGGTCTGCATCAGCTACCCAACCCGGGGCGTTGGAGTGGGGTGAGGGGTATTACAATGGGGACATAAAGACTAGGAAAACAAGTCAAGCAGTAGAACTTAATTCTGACCAAATAGGTTTGCAGAGGAGTGAGCAGTTGAGAGAGCTATTCGGGTCTCTCGCAACTGCAGAATCCACCCCACAAACTAAAAGGCCATCAGCTGCACTAACCCCTGAAGATCTCACAGATACTGAGTGGTATTACATGGTTTGCATGTCTTTCGTATTCAATATTGGCCAAGGGTTACCTGGACGAACTCTATTGAATGGCCAACCAATATGGGTATGCAATGCCCATTGTGCTGATAGCAGAGTTTTTAGTCGCTCCCTGCTGGCAAAGACAGTGGTGTGCTTTCCTTTTCTGGAAGGTGTTATTGAGCTTGGTACAACTGATATGATTTCAGAAGACCTCAGTCTCATTCAACGCATCAGAACTTCTTTCTTGGATATTCTGGATACCAAAATTTCTAACAAGTCTGGATCTGCATTAAAAACAAGAAACAAGAGGGATGTTACTTCTGTATTAGTTGATCATAATGCTTGTGATGCCAAATTAACAGAAGTGGGATATGATGTAACCAATATAACTTCTCCCAATAGTGGTTCAAATGCATTTGAAGCAAATCAACCAGTGGATGAGACACATATGGTTGAAAGAATAAATGGTGGTGTTTCTCAAGTCCAAAGCTGGCAAGTTATCGATGAGGAATTGAGTAATAATGTCCATAACTCGATGGATTCTAGTGACTGCATATCTCAAACTTTTGCCAATTCTGAAAAGATTGCCTCTGTTCCCAAGGGTCAAGACCCAACTGAACATTTTGCCCAAGACCTTCAAGAGTGCAATAACATAAAAATGACCTCAGTGGATCTTCAAAGCGATGATTGGTATTATCAAAAAGTTCTTTCGGTGCTTCTAAAAGGGTCAGACCAGTTAATTATGGGAGCAAATTTTCAAAGTAGTCACAAGGAATCCAGCTTTGTTAGTTGGAAGAAAGGAGCATCACTAGGTTGTCAAAGGCCGAGGGGAGGAAACCCACAAAAATTATTGAAGAAGGTATTGTTTGAAGTTCCTCAGATGCACATAGATGGGCTGCTTGAGTATCAAGAAGAGAACAACTTCAGAGAGCGAATAAGACCAGAGGTTGATGAAAATGGCATGAACCACGTATTGTCAGAAAGGAGGAGAAGGGCAAAACTAAATGAAAGGTTCTTAACCCTTAGATCAATGGTACCTTCAATTAGTAAGGATGACAAAGTTTCAATTCTGGATGATGTTATAGAATACCTTAGAAAGCTCGAGAAAAAGGTAAGAGAAATGGAAGCATGCAGGGAGCTAAGAGATTTAGGGACTAAAGCTAAAAGAACACCTCAAGATTTGGTGGAGAGGACTTCTGATAATTATTTTAACAAAAAAACTGATAGTGGCAAGAAGCCAATGATAAACAAGAGAAAGGCGTGTGAGATTGATGAGTCATGGCAAGAGAGTGACTCAGTTGCTCTAAAAGATAGTTCTACTAACAGCATTAACATCAGTATGAGCGATACTGAAGTTCTGATAGAAATGAGGTGTCCATGGAGAGAAGGAGTGGTGCTTGAAATTATGGAAGCACTTAGCAGTCTCCACTTGGATTTTCATTCAGTTCAGTCATCAGAATCTGATGGGAATCTTTATCTAACCATTAAATCTAAGTTCAGAGGACCAACCGTTGCATCGGCGAAAAAGATCAAACAAGTCCTCCAAAAAGCGTCTTGGAAGTGTTGA 1860 0.4091 MKKQLALAVRSIQWSYAVFWSASATQPGALEWGEGYYNGDIKTRKTSQAVELNSDQIGLQRSEQLRELFGSLATAESTPQTKRPSAALTPEDLTDTEWYYMVCMSFVFNIGQGLPGRTLLNGQPIWVCNAHCADSRVFSRSLLAKTVVCFPFLEGVIELGTTDMISEDLSLIQRIRTSFLDILDTKISNKSGSALKTRNKRDVTSVLVDHNACDAKLTEVGYDVTNITSPNSGSNAFEANQPVDETHMVERINGGVSQVQSWQVIDEELSNNVHNSMDSSDCISQTFANSEKIASVPKGQDPTEHFAQDLQECNNIKMTSVDLQSDDWYYQKVLSVLLKGSDQLIMGANFQSSHKESSFVSWKKGASLGCQRPRGGNPQKLLKKVLFEVPQMHIDGLLEYQEENNFRERIRPEVDENGMNHVLSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDVIEYLRKLEKKVREMEACRELRDLGTKAKRTPQDLVERTSDNYFNKKTDSGKKPMINKRKACEIDESWQESDSVALKDSSTNSINISMSDTEVLIEMRCPWREGVVLEIMEALSSLHLDFHSVQSSESDGNLYLTIKSKFRGPTVASAKKIKQVLQKASWKC 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1271 619 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 419 477 IPR036638 GO:0046983
Bisa01g1271 619 SMART finulus 422 471 IPR011598 GO:0046983
Bisa01g1271 619 Gene3D - 417 488 IPR036638 GO:0046983
Bisa01g1271 619 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 416 465 IPR011598 GO:0046983
Bisa01g1271 619 Pfam Helix-loop-helix DNA-binding domain 420 466 IPR011598 GO:0046983
Bisa01g1271 619 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 1 179 IPR025610 -
Bisa01g1271 619 PANTHER TRANSCRIPTION FACTOR TT8 2 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1271 Bisa-ChrBisa01 21228605 21231763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1271 1 619 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.295 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1271 bHLH-MYC_N 6.7e-47 CL0161