Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1268 ATGAAATGGGAAACGTTCGGTTTGTTGAGGTTTGGGATGGGTTGTGACATTTCCAAGTTTTCAGCATGCTGCTTAGGCAGAGAACAAAGTGGTCCAGTTCCTGAAGCCCACGTTAATGAAAACGAAGAGAATAGTGAGGCCACTGATTTGCCACCATTTCGTGAATACACAATCGATCAGCTTAGGAAGGCTACTTCTGGATTTGCAATTGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATATAGTTTATAGAGGGAAACTGGAAAATCAAACTCGAATTGCTGTCAAACGGTTCAATAGATCAGCCTGGCCAGATGCCAGGCAGTTTTTGGATGAAGCCAGGGCTGTTGGTCAGCTACGGAACCAAAGATTGGTAAATCTACTTGGGTGTTGCTCTGAAGGTGATGAGAGGTTACTTGTTGCGGAATATATGCCCAATGATACTTTGGCAAAGCACTTGTTCCACTGGGAAACTCAACCAATGAAATGGGCAATGCGACTGAGAGTTGCTCTATACCTTGCCCAAGCGCTCGAATACTGTACAAGCAAAGGACGTGCTTTATATCATGATCTAAACGCTTATAGAGTTCTTTTTGATGATGAAGGAAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGTAAAAGTTATAGTACAAATCTGGCATTTACTCCACCTGAGTATTTAAGGACAGGTAGAGTTACTCCAGAAAGCGTAACATATAGCTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCACTTGACTTGATCCGGGACAGGAACCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCAAATGATGAAGGGACTGAATTAGTGCGCTTAGCCTCACGATGTTTACAATCTGAACCACGGGAGCGTCCTAATCCAAAGTCATTGGTTACTGCTTTAATACCTCTCCAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCACATGGTACTACTGCTTTACCCCTTTCACCGCTTGGTGAAGCTTGTCTAAGAATGGATTTGACTGCCATCCATGAGATCCTTGAAAAGATTGGGTATAAAGATGATGAGGGTGCTGCCACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAAGAAACGTTGAACTCAAAGAAGAAGGGTGATTCTGCATTCCGTCATAAAGACTTTAAAACTGCAATTGATAGCTATACTCAGTTCATTGATGTTGGAACCATGGTTTCTCCAACAGTTTATGCACGACGTAGTCTGTCTTATCTCATGAGCAATATGCCAGAAGAAGCACTTCAGGATGCAATGCAGGCACAAATAATATCCCCTGTCTGGTACATTGCATCCTATCTACAAGCTGTGGCACTTCTTGCACTGGGCAGGGAGAACGAGGCTCATGTGGCACTTAAAGAGGGTTCTTCTCTTGAAAGTAAAAAGAGCACAAATTAG 1500 0.4273 MKWETFGLLRFGMGCDISKFSACCLGREQSGPVPEAHVNENEENSEATDLPPFREYTIDQLRKATSGFAIENIVSEHGEKAPNIVYRGKLENQTRIAVKRFNRSAWPDARQFLDEARAVGQLRNQRLVNLLGCCSEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPHGTTALPLSPLGEACLRMDLTAIHEILEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKTAIDSYTQFIDVGTMVSPTVYARRSLSYLMSNMPEEALQDAMQAQIISPVWYIASYLQAVALLALGRENEAHVALKEGSSLESKKSTN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1268 499 SUPERFAMILY TPR-like 398 493 IPR011990 GO:0005515
Bisa01g1268 499 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Bisa01g1268 499 Gene3D Transferase(Phosphotransferase) domain 1 148 339 - -
Bisa01g1268 499 SUPERFAMILY Protein kinase-like (PK-like) 43 332 IPR011009 -
Bisa01g1268 499 FunFam probable serine/threonine-protein kinase At4g35230 392 499 - -
Bisa01g1268 499 MobiDBLite consensus disorder prediction 32 51 - -
Bisa01g1268 499 ProSiteProfiles Protein kinase domain profile. 71 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1268 499 Pfam Protein tyrosine and serine/threonine kinase 85 321 IPR001245 GO:0004672|GO:0006468
Bisa01g1268 499 Gene3D Tetratricopeptide repeat domain 392 499 IPR011990 GO:0005515
Bisa01g1268 499 FunFam probable serine/threonine-protein kinase At5g41260 148 339 - -
Bisa01g1268 499 FunFam probable serine/threonine-protein kinase At4g35230 43 146 - -
Bisa01g1268 499 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 33 497 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1268 Bisa-ChrBisa01 21181690 21190108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1268 26 322 Glycoside Hydrolase AT3G07070 34.139 6.60e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa01g1268 PK_Tyr_Ser-Thr 2.1e-27 CL0016