Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1260 ATGGATGGGAGAGAAGCTATGGCATTCTCAGGTGGCTCACCTTCATATTATATACATAGAGGAAATGTTTCTGGGTCTGGCTCTGGAACACAGACCCAGGGGTTCCAACAAGCACCCCCTGGGTTCAGACCCTTGACAAACGCTGGCTTTCAAGCTCAGTCAAGTGTACGAGGTGGTTCTGTCGGTTCTACATTTTCGGCAGAGCCTCCTCGTACCAATTTTAGTCCTGGCAACGCTAACATGGGTTCCACTCCTGGAGTACCTTCAGGTCAGCCCCTGAAGAAGAAAAGAGGGAGGCCCCGAAAATATGGTCCTGGTGGTCCTGTTTCTTTGAGACTGTCTCCCATGTCTGCACCTGCTAATTCTGCCCCTGGTTCAAGCACGCCTTCCGAGAAACGAAACAGAGGACGCCCGCCTGGAAGTGGAAGGAAGCAACAACTAGCGTCTTTGGGTGAATGGATGAACAGTTCTGCAGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGCGAGGACATTGTAGCAAAGTTATTGTCCTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACGGTTTCTTCAGTTACTCTGCGCCAGCCTGCTTCTACTAGCGTCAGTCACACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCCGGTTCATACTTAGTTGCTGAAGATGGTGGACCCCGTGATAGAACTGGTGGTTTGAGCGTTTCCCTTTCTAGCCCTGAGGGTCATGTTATTGGTGGTGGTGTTGCTGTGCTCATTGCCGCAAGCCCAGTGCAGGTAGTAGTGTGCAGTTTTGTGCATGGAAGCTCTAAGACAAAGGCCAAGCAAGTGACCTCTCCCAAAGATGAGACTCAGCCTAAGCCTCAGCCCCAGACGCAGACTCAGACGCAGACTCAGCATGATGGTCGTAAGTTGAGTTCTCCAAATCCACCAAGTGCTCAAAACTACACGTTGTCTGGAACAGGCATTTGGCCAGGAGATCTGAAAAGCACACACACTCGCACTGGTTTTGACTTGACTCGTGGCTGA 1062 0.5066 MDGREAMAFSGGSPSYYIHRGNVSGSGSGTQTQGFQQAPPGFRPLTNAGFQAQSSVRGGSVGSTFSAEPPRTNFSPGNANMGSTPGVPSGQPLKKKRGRPRKYGPGGPVSLRLSPMSAPANSAPGSSTPSEKRNRGRPPGSGRKQQLASLGEWMNSSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASTSVSHTYEGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPEGHVIGGGVAVLIAASPVQVVVCSFVHGSSKTKAKQVTSPKDETQPKPQPQTQTQTQTQHDGRKLSSPNPPSAQNYTLSGTGIWPGDLKSTHTRTGFDLTRG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1260 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 282 - -
Bisa01g1260 353 CDD DUF296 164 276 IPR005175 -
Bisa01g1260 353 MobiDBLite consensus disorder prediction 283 353 - -
Bisa01g1260 353 MobiDBLite consensus disorder prediction 115 134 - -
Bisa01g1260 353 Gene3D - 164 295 - -
Bisa01g1260 353 MobiDBLite consensus disorder prediction 47 87 - -
Bisa01g1260 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 67 319 IPR039605 GO:0003680
Bisa01g1260 353 MobiDBLite consensus disorder prediction 1 147 - -
Bisa01g1260 353 ProSiteProfiles PPC domain profile profile. 156 298 IPR005175 -
Bisa01g1260 353 MobiDBLite consensus disorder prediction 17 40 - -
Bisa01g1260 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1260 Bisa-ChrBisa01 21067431 21071129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1260 1 353 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.131 2.98e-95 286