Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1252 ATGGGTTCCATTTCAAAAACAGAGGGATATTATTGGGGATGCATAAGCAACTTGCAGTGCTGCGGCAATCTGTCGCCGGAGCCACACTATCCGTCGATCACACGCTTTCCGAAGTCCGCGTCGGCGTCGTCGGCGTCGCCGGTGGCGGAATGGTCGGAGGCTAAAGCCGTATTCAGAGTGGCGGGAATGACGTGCGGTGCGTGTGCGGGATCGGTGGAAAAAGCCATCAAGCGCCTCCCTGGCATACGCGAGGCGGTGGTCGATGTCTTAAACGATAAGGCTCAGGTTCTCTACTATCCTTCTATGGTTCACGAGGAGAGAATAAGAGAGGCCATTGAAGATGCTGGATTTGAAGTCAAGTCCATCGAAGATGAATCCAATGAGACCCCTTCTCGAATCTGCCGAATACACATTAAGGGTATGACTTGCACTTCTTGCTCCTCCACTGTTGAATCCGCCCTGCAAGCCATTCCAGGTGTGCAGAGAGCTCAAGTGGCGTTGGCAACTGAGGAAGCAGAAGTCCGATATGACCCTAGGATTGTCACCTACAATCATCTATCGGAAGCCATAGAAAACACTGGGTTTGAAGCCATACTAATTAGCACAGGGGAACACATAAGCAAAATAGAACTGAAAGTTGATGGCATAAAGAATGAGCAATCCGTGAGAGCAATTGAAAAATCTCTCCAGTCACTTGCAGGCGTTGAAAACATAGACATTTATAAGGACATCAAGAAAATTTCCATTTCTTATAAACCTTATATGACAGGACCCAGAACCTTCATCGAAGTCATAGAGTCTTCGGAGTCTGGGGGTTTCAGAGCCAGCATATTTCCTGATGGAGGAGGAATAGAAACTCACAGACAAGAGGAAATTAACAAGTACTTCAAGTTGATTATATGGAGTTTGGCTTTCTCGATTCCTGTATTTTTAACATCCATGCTCTTTATGTATATTCCCGGAATTAAGCATGCTTTAGATAAAAAAGTGGTGAACAAGCTGACTATTGGACTGATCTTGAGGTGGGAATTTTCCACCCCAGTACAGTTCATCATAGGCTGGAGATTCTACATTGGATCTTACAAGGCTTTGAGCAATGGTTCTGCTAACATGGATGTACTGATCGCCTTGGGAACAAATGCAGCCTATTTCTACTCTGTTTATGTTGTGGGAAGAGCTGCTTTCTCTAAAGATTTCATGGGCAGCGATTTCTTTGAGACCAGCTCTATGCTTATCTCATTTATTCTACTTGGCAAGTACTTGGAGGTGTTAGCAAAAGGAAAAACATCCCAAGCCATTGCCAAGCTTATGGAATTGACCCCTGAGACAGCAATCTTGTTAAGTCAAGATGATGAAGGTAATGTCACGAGTGAAGAACAGATTGATAGCCGATTGATACAGAAGGACGATGTGATAAAAATTGTACCTGGTGCCAAAGTAGCATCGGATGGTTTTGTTGTGTGGGGACAAAGCCACATAAATGAGAGCATGATAACTGGAGAAGCAAGGCATGTGGCAAAGAGGAAGGGTGATATGGTGATTGGAGGCACTGTGAATGGGAATGGGGTTTTGCATGTGAAGGTGACTAGAATTGGATCAGAGAGTGCCCTCTCACAGATTGTTCGACTTGTTGAGTCTGCTCAGATGGCTAAAGCTCCAGTTCAGAAGCTTGCAGATCGCATTTCCAAATACTTTGTGCCTCTGGTCATAGCGCTTTCCCTTTCGACTTGGGTGACCTGGTTTTTAGCTGGGCAATTACACGCATTCCCAGAATCCTGGATTCCATCGTCCATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATCTCTGTGATGGTCATAGCTTGCCCTTGTGCTCTGGGCCTAGCCACTCCTACGGCTGTCATGGTTGGTACTGGAGTGGGTGCGACACAGGGCGTGTTGATCAAAGGTGGTCAAGCATTAGAAAGGGCACACAAGGTGAATTGCATTGTGTTCGATAAGACAGGGACTCTTACAGTTGGGAAGCCAGTCGTTGTTACCACGAAGCTCTTCAAGAAGATAACATTTCGAGATTTCTACGAATATGTAGCTTCAGCAGAGGTGAACAGTGAACACCCAATAGCCAAGGCCATTGTTGAGCACGCTGAGAAGATCACTGAAGACGAACAGAATCCTGTTTGGCCAGAAGCACGTGACTTTCTTTCCATTTCGGGCCATGGGGTGAAGGCCGTTGTTCGAAACAAGGAAATAATGGTTGGGAATAAGAAGTTGATGCAGGATCATAACATAGCCATTCCAGTGGATGCTGAAGAAACACTAGCAGAGGCTGAAAGTTTGGCACAAACTGGGATTCTAGTATCCATAGATGGAGAAATTGCAGGTGTTATTGCTGTATCTGACGCATTGAAACCAGGTGCCAAAGAAGTTATTTCCATTCTCAACTCTATGAAAATCAGAAGCATCCTGGTGACAGGTGATAACTGGGGAACTGCCAATGCCATTGCTAGGCAAGTTGGGATTGAAGCTGTTGTTGCTGAAGCCCAGCCTAAGGCTAAAGCAGAAAAAGTGAAAGATTTGCAGACTTCCGGCTACACCGTGGCAATGGTTGGAGATGGCATCAACGACTCACCAGCACTTGTGGCAGCTGATGTTGGAATGGCAATCGGTGCCGGCACAGATATTGCCATTGAAGCAGCTGACATAGTTCTCATGAGAAGCAACTTGGAGGATATCATAATTGCCATTGATCTTGCAAAGAAAACTTTCTCCCGGATTCGTCTAAATTACATTTGGGCTCTGGGATACAATCTGTTGGCCATTCCAGTTGCTGCCGGAACCCTTTACCCGTCCACAAGATTCCGATTACCGCCGTGGATTGCAGGAGCTGCAATGGCGGCCTCTTCTGTCAGTGTTGTCTGCTCCTCTCTCTTGCTTAAGAACTACAAGCGACCCCAGAAGCTCAACAATTTGGAGATATATAGTATTAAGATTGAATAG 2979 0.4596 MGSISKTEGYYWGCISNLQCCGNLSPEPHYPSITRFPKSASASSASPVAEWSEAKAVFRVAGMTCGACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYYPSMVHEERIREAIEDAGFEVKSIEDESNETPSRICRIHIKGMTCTSCSSTVESALQAIPGVQRAQVALATEEAEVRYDPRIVTYNHLSEAIENTGFEAILISTGEHISKIELKVDGIKNEQSVRAIEKSLQSLAGVENIDIYKDIKKISISYKPYMTGPRTFIEVIESSESGGFRASIFPDGGGIETHRQEEINKYFKLIIWSLAFSIPVFLTSMLFMYIPGIKHALDKKVVNKLTIGLILRWEFSTPVQFIIGWRFYIGSYKALSNGSANMDVLIALGTNAAYFYSVYVVGRAAFSKDFMGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMELTPETAILLSQDDEGNVTSEEQIDSRLIQKDDVIKIVPGAKVASDGFVVWGQSHINESMITGEARHVAKRKGDMVIGGTVNGNGVLHVKVTRIGSESALSQIVRLVESAQMAKAPVQKLADRISKYFVPLVIALSLSTWVTWFLAGQLHAFPESWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALERAHKVNCIVFDKTGTLTVGKPVVVTTKLFKKITFRDFYEYVASAEVNSEHPIAKAIVEHAEKITEDEQNPVWPEARDFLSISGHGVKAVVRNKEIMVGNKKLMQDHNIAIPVDAEETLAEAESLAQTGILVSIDGEIAGVIAVSDALKPGAKEVISILNSMKIRSILVTGDNWGTANAIARQVGIEAVVAEAQPKAKAEKVKDLQTSGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMRSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNLLAIPVAAGTLYPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKNYKRPQKLNNLEIYSIKIE 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1252 992 ProSiteProfiles Heavy-metal-associated domain profile. 132 198 IPR006121 GO:0046872
Bisa01g1252 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 660 666 IPR018303 -
Bisa01g1252 992 NCBIfam copper ion binding protein 136 197 IPR006122 GO:0005507
Bisa01g1252 992 NCBIfam copper ion binding protein 56 119 IPR006122 GO:0005507
Bisa01g1252 992 FunFam Copper-transporting ATPase HMA5 131 202 - -
Bisa01g1252 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 409 650 IPR023298 -
Bisa01g1252 992 Gene3D - 665 743 IPR023299 GO:0000166
Bisa01g1252 992 Gene3D - 744 794 IPR023299 GO:0000166
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 788 799 - -
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 494 508 - -
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 810 820 - -
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 658 672 - -
Bisa01g1252 992 PRINTS P-type cation-transporting ATPase superfamily signature 886 898 - -
Bisa01g1252 992 Gene3D - 207 278 - -
Bisa01g1252 992 Pfam haloacid dehalogenase-like hydrolase 654 877 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 840 857 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 567 581 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 408 427 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 428 446 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 936 950 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase signature 356 375 - -
Bisa01g1252 992 ProSiteProfiles Heavy-metal-associated domain profile. 207 273 IPR006121 GO:0046872
Bisa01g1252 992 SUPERFAMILY HMA, heavy metal-associated domain 54 125 IPR036163 GO:0046872
Bisa01g1252 992 CDD HMA 57 120 IPR006121 GO:0046872
Bisa01g1252 992 CDD HMA 138 197 IPR006121 GO:0046872
Bisa01g1252 992 NCBIfam heavy metal translocating P-type ATPase 371 972 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bisa01g1252 992 Gene3D - 49 121 - -
Bisa01g1252 992 FunFam Copper-transporting ATPase HMA5 53 124 - -
Bisa01g1252 992 Gene3D - 426 548 - -
Bisa01g1252 992 Gene3D - 132 203 - -
Bisa01g1252 992 SUPERFAMILY Calcium ATPase, transduction domain A 458 544 IPR008250 -
Bisa01g1252 992 CDD P-type_ATPase_Cu-like 300 959 - -
Bisa01g1252 992 ProSitePatterns Heavy-metal-associated domain. 60 89 IPR017969 GO:0046872
Bisa01g1252 992 SUPERFAMILY HMA, heavy metal-associated domain 132 204 IPR036163 GO:0046872
Bisa01g1252 992 SUPERFAMILY HAD-like 657 969 IPR036412 -
Bisa01g1252 992 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 21 989 - -
Bisa01g1252 992 Pfam Heavy-metal-associated domain 57 118 IPR006121 GO:0046872
Bisa01g1252 992 Pfam Heavy-metal-associated domain 136 196 IPR006121 GO:0046872
Bisa01g1252 992 SUPERFAMILY HMA, heavy metal-associated domain 203 277 IPR036163 GO:0046872
Bisa01g1252 992 NCBIfam HAD-IC family P-type ATPase 411 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g1252 992 ProSiteProfiles Heavy-metal-associated domain profile. 54 120 IPR006121 GO:0046872
Bisa01g1252 992 CDD HMA 210 276 IPR006121 GO:0046872
Bisa01g1252 992 FunFam Probable copper-transporting ATPase HMA5 763 920 - -
Bisa01g1252 992 SFLD C1.7: P-type atpase like 640 914 - -
Bisa01g1252 992 FunFam Copper-transporting ATPase 1, putative 426 548 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase 1 signature 110 130 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase 1 signature 55 80 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase 1 signature 81 104 - -
Bisa01g1252 992 PRINTS Copper-transporting ATPase 1 signature 156 177 - -
Bisa01g1252 992 Gene3D - 625 920 IPR023214 -
Bisa01g1252 992 Pfam E1-E2 ATPase 439 636 - -
Bisa01g1252 992 SFLD p-type atpase 640 914 IPR044492 -
Bisa01g1252 992 ProSitePatterns Heavy-metal-associated domain. 138 167 IPR017969 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1252 Bisa-ChrBisa01 20971813 20980372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1252 54 992 Primary Pumps ATPases AT1G63440 73.489 0.0 1449