Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1247 ATGAAATTATGTACTTCATTGTTGCTTGTCGGTTTAATTTCTACGGTCTCCTTTGTGACTTGCAATACTGTGGCCTCAAATGAAGTTTTGGCGCTTACAATGTTCAAAGAAGCTATCTATGAAGATCCATCTCTAGTTTTGTCCAATTGGAATACGATGGATTCAGATCCTTGTGATTGGAATGGCGTTTTTTGCAATCCGGCCCGAGATCATGTTATTAAGCTAAATATTTCGAGCTCATCATTAAGGGGATTTTTAGCACCAGAATTGGGAAAAATTACCTACTTGGGAGAATTGTATGTTCTTTGTTTCTCCTATTCAGATGTCATCCAGAAAACCTGTCTAGGGATGATGTCATTTTGTTGTGCTATAGTTCTGGAAATATGCGGGTTAAAAGTATTTTCTGGTTCATATGTATGTAGGATTTTGCACGGCAATAAACTGATTGGAATAATACCTAAAGAGTTGGGCATGTTGAAATCTCTCAAGGTCTTGGATTTGGGGATGAATCAGCTTACTGGACCAATTCCTCCAGAAATCGGAAATTCAACCCAGTTAGTGAAAATGTATGCCTCAAATGCGAATTCAACTGGCTTCTGTCATTCGTCTCAGTTAAAGGTTGCTGATTTTTCCTATAACTTTTTTGTTGGTAGCATCCCAAAATGCTTGGAGTATCTTCCAAGGTCAAGCTTTCAAGGGAATTGCCTCCAGATCAAGGACATAAAGCAACGCTCTTCTGTGCAATGTGCTGGTGCTTCACCTGCCACGGGCCGTCCAGTAATCAACCAAAAGCACCGGACTGCTGATTATTTGTCCAAGCGTCAAGGAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACAGGAACCATGGTTGGTTCCCTATTTCTAGTTGCTCTTCTAACTGCTTTTCAAAGGTTTAATAACAAGTCATCTATCATTATTCCTTGGAAGAAATCTGCAAGCGAGAAGGACCATACGACTATATATATAGACTCTGAGATGTTGAAGGATGTAAGGAGATATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATTATTGGGTCCTCGCCGGACAGTGTGGTCTACAAGGGCACCATGAAAGGTGGGCCTGAGATAGCTGTAATTTCCCTTTGTATCAAGGAGGAGCATTGGACAGGTTACCTTGAACTCTATTTCCAGAGAGAGGTGGCAGACCTGGCAAGGATAAATCATGAGAACACTGGAAAACTACTGGGATATTGTAAAGAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAGTATGCTTCAAATGGGACACTTTATGAGCACCTACATTATGGAGAGGGATGCCAATTATCATGGACACGGCGTATGAATATTATTATAGGCATTGCACGTGGACTCAAGTATCTGCATACTGAAGTTGAGCCCCCATTCACAATCTCAGAGCTAAATTCCAGTGCTGTATACCTTACAGAAGATTTCGCCCCAAAGCTTGTTGATTTTGAAAGTTGGAAGACAATTCTGGAAAGATCAGAAAAGAATTCTGGTTCTGTTGGTAGCCAAGGTGCTGTTTGTGTACTTCCAAATTCCCTAGAGGCACGCCGTCTGGATACCCAAGGAAACATACATGCTTTCGGTGTACTTCTACTGGAGATAATCAGCGGAAGATCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCGAAGGACTATCTTGAAATGCCAGAAGTAATGTCATATTTGGTGGATCCCGAATTGAAACATTTTAGATATGATGACCTTAAAGTAATATGTGAGGCAATAAATCTCTCTATCAATCCGGACCCCACAAGGCGTCCAGGGATGCAAGAACTGAGTAACATGCTGGAGAGCGGAATTGACACATCCATAACTTCGGAGCTCAAGGCATCATCGTTGGCTTGGGCTGAACTTGCACTGTCATCATAA 1959 0.4196 MKLCTSLLLVGLISTVSFVTCNTVASNEVLALTMFKEAIYEDPSLVLSNWNTMDSDPCDWNGVFCNPARDHVIKLNISSSSLRGFLAPELGKITYLGELYVLCFSYSDVIQKTCLGMMSFCCAIVLEICGLKVFSGSYVCRILHGNKLIGIIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNSTQLVKMYASNANSTGFCHSSQLKVADFSYNFFVGSIPKCLEYLPRSSFQGNCLQIKDIKQRSSVQCAGASPATGRPVINQKHRTADYLSKRQGASKPAWLLALEIVTGTMVGSLFLVALLTAFQRFNNKSSIIIPWKKSASEKDHTTIYIDSEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCKESTPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMNIIIGIARGLKYLHTEVEPPFTISELNSSAVYLTEDFAPKLVDFESWKTILERSEKNSGSVGSQGAVCVLPNSLEARRLDTQGNIHAFGVLLLEIISGRSPYCKDKGYLVDWAKDYLEMPEVMSYLVDPELKHFRYDDLKVICEAINLSINPDPTRRPGMQELSNMLESGIDTSITSELKASSLAWAELALSS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1247 652 Gene3D Transferase(Phosphotransferase) domain 1 436 642 - -
Bisa01g1247 652 Gene3D Phosphorylase Kinase; domain 1 327 435 - -
Bisa01g1247 652 Gene3D Ribonuclease Inhibitor 25 246 IPR032675 -
Bisa01g1247 652 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1247 652 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Bisa01g1247 652 SUPERFAMILY Protein kinase-like (PK-like) 331 626 IPR011009 -
Bisa01g1247 652 FunFam Inactive receptor-like serine/threonine-protein kinase 328 435 - -
Bisa01g1247 652 Pfam Protein tyrosine and serine/threonine kinase 358 625 IPR001245 GO:0004672|GO:0006468
Bisa01g1247 652 PANTHER PROTEIN MALE DISCOVERER 2 10 112 - -
Bisa01g1247 652 SUPERFAMILY L domain-like 27 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1247 Bisa-ChrBisa01 20860347 20864543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1247 1 632 Receptor kinase-like Gene Family AT2G35620 29.032 1.87e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bisa01g1247 PK_Tyr_Ser-Thr 2.8e-19 CL0016