Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1243 ATGAGACAAGCAGGAGCGTATTCGGGGATATACTGTGGGGGTATTTCTGGAAAAATGGGGCCTAACTCGCTGCCTTTAGCGAGAATAAAGAAGATAATGAAGAAGTCAGGGTCAGGGGATGACGTGAAGATGATATCAGGAGAGGCTCCTATTGCTTTTGCCAAAGCTTGTGAGCTGTTCATTGAGGAGCTAACTCAAAGGTCGTGGATGATGACCGCCCAATCCAAAAGGAGGACTCTCCTCAAAGACGACGTCGCTTCCGCCATTATTGCCACTGACCTCTTCGACTTCTTGATCGCTTTAGTTTCCAATTCTCCCTCCCCCACCTAA 330 0.4818 MRQAGAYSGIYCGGISGKMGPNSLPLARIKKIMKKSGSGDDVKMISGEAPIAFAKACELFIEELTQRSWMMTAQSKRRTLLKDDVASAIIATDLFDFLIALVSNSPSPT 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1243 109 FunFam Nuclear transcription factor Y subunit C 12 104 - -
Bisa01g1243 109 SUPERFAMILY Histone-fold 18 98 IPR009072 GO:0046982
Bisa01g1243 109 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 106 - -
Bisa01g1243 109 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 89 IPR003958 -
Bisa01g1243 109 Gene3D Histone, subunit A 15 104 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1243 Bisa-ChrBisa01 20810335 20810664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1243 22 102 CCAAT-HAP5 Transcription Factor Family AT1G54830 61.728 2.37e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa01g1243 CBFD_NFYB_HMF 5e-17 CL0012